eF-site ID 1loj-J PDB Code 1loj Chain J click to enlarge Title Crystal structure of a Methanobacterial Sm-like archaeal protein (SmAP1) bound to uridine-5'-monophosphate (UMP) Classification RNA BINDING PROTEIN, transcription Compound small nuclear ribonucleoprotein homolog (Sm-like) Source Methanobacterium thermoautotrophicum (strain Delta H) (RUXX_METTH) Sequence J:  VQRPLDALGNSLNSPVIIKLKGDREFRGVLKSFDLHMNLV LNDAEELEDGEVTRRLGTVLIRGDNIVYISRGKLAA Description Functional site 1) chain J residue 46 type sequence H description BINDING SITE FOR RESIDUE URI J 9001 source : AC1 2) chain J residue 48 type sequence N description BINDING SITE FOR RESIDUE URI J 9001 source : AC1 3) chain J residue 72 type sequence R description BINDING SITE FOR RESIDUE URI J 9001 source : AC1 4) chain J residue 73 type sequence G description BINDING SITE FOR RESIDUE URI J 9001 source : AC1 5) chain J residue 74 type sequence D description BINDING SITE FOR RESIDUE URI J 9001 source : AC1 6) chain J residue 72 type sequence R description BINDING SITE FOR RESIDUE U I 9002 source : AC2 7) chain J residue 45 type sequence L description BINDING SITE FOR RESIDUE U K 9014 source : BC5 8) chain J residue 46 type sequence H description BINDING SITE FOR RESIDUE U K 9014 source : BC5 9) chain J residue 47 type sequence M description BINDING SITE FOR RESIDUE U K 9014 source : BC5 10) chain J residue 17 type sequence A description BINDING SITE FOR RESIDUE MPD J 7001 source : BC6 11) chain J residue 18 type sequence L description BINDING SITE FOR RESIDUE MPD J 7001 source : BC6 12) chain J residue 21 type sequence S description BINDING SITE FOR RESIDUE MPD J 7001 source : BC6 13) chain J residue 79 type sequence I description BINDING SITE FOR RESIDUE MPD J 7001 source : BC6 14) chain J residue 81 type sequence R description BINDING SITE FOR RESIDUE MPD J 7001 source : BC6 15) chain J residue 68 type sequence T description BINDING SITE FOR RESIDUE MPD I 7014 source : DC1

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