eF-site ID 1loj-B
PDB Code 1loj
Chain B

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Title Crystal structure of a Methanobacterial Sm-like archaeal protein (SmAP1) bound to uridine-5'-monophosphate (UMP)
Classification RNA BINDING PROTEIN, transcription
Compound small nuclear ribonucleoprotein homolog (Sm-like)
Source null (RUXX_METTH)
Sequence B:  VQRPLDALGNSLNSPVIIKLKGDREFRGVLKSFDLHMNLV
LNDAEELEDGEVTRRLGTVLIRGDNIVYISRGKLAA
Description


Functional site

1) chain B
residue 46
type
sequence H
description BINDING SITE FOR RESIDUE URI B 9007
source : AC7

2) chain B
residue 48
type
sequence N
description BINDING SITE FOR RESIDUE URI B 9007
source : AC7

3) chain B
residue 72
type
sequence R
description BINDING SITE FOR RESIDUE URI B 9007
source : AC7

4) chain B
residue 73
type
sequence G
description BINDING SITE FOR RESIDUE URI B 9007
source : AC7

5) chain B
residue 74
type
sequence D
description BINDING SITE FOR RESIDUE URI B 9007
source : AC7

6) chain B
residue 72
type
sequence R
description BINDING SITE FOR RESIDUE U A 9010
source : BC1

7) chain B
residue 47
type
sequence M
description BINDING SITE FOR RESIDUE URI C 9011
source : BC2

8) chain B
residue 17
type
sequence A
description BINDING SITE FOR RESIDUE MPD B 7011
source : CC7

9) chain B
residue 18
type
sequence L
description BINDING SITE FOR RESIDUE MPD B 7011
source : CC7

10) chain B
residue 21
type
sequence S
description BINDING SITE FOR RESIDUE MPD B 7011
source : CC7

11) chain B
residue 80
type
sequence S
description BINDING SITE FOR RESIDUE MPD B 7011
source : CC7

12) chain B
residue 81
type
sequence R
description BINDING SITE FOR RESIDUE MPD B 7011
source : CC7


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