eF-site ID 1loj-A
PDB Code 1loj
Chain A

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Title Crystal structure of a Methanobacterial Sm-like archaeal protein (SmAP1) bound to uridine-5'-monophosphate (UMP)
Classification RNA BINDING PROTEIN, transcription
Compound small nuclear ribonucleoprotein homolog (Sm-like)
Source null (RUXX_METTH)
Sequence A:  VNVQRPLDALGNSLNSPVIIKLKGDREFRGVLKSFDLHMN
LVLNDAEELEDGEVTRRLGTVLIRGDNIVYISRGKL
Description


Functional site

1) chain A
residue 45
type
sequence L
description BINDING SITE FOR RESIDUE URI B 9007
source : AC7

2) chain A
residue 47
type
sequence M
description BINDING SITE FOR RESIDUE URI B 9007
source : AC7

3) chain A
residue 46
type
sequence H
description BINDING SITE FOR RESIDUE U A 9010
source : BC1

4) chain A
residue 48
type
sequence N
description BINDING SITE FOR RESIDUE U A 9010
source : BC1

5) chain A
residue 72
type
sequence R
description BINDING SITE FOR RESIDUE U A 9010
source : BC1

6) chain A
residue 73
type
sequence G
description BINDING SITE FOR RESIDUE U A 9010
source : BC1

7) chain A
residue 74
type
sequence D
description BINDING SITE FOR RESIDUE U A 9010
source : BC1

8) chain A
residue 17
type
sequence A
description BINDING SITE FOR RESIDUE MPD A 7005
source : CC1

9) chain A
residue 21
type
sequence S
description BINDING SITE FOR RESIDUE MPD A 7005
source : CC1

10) chain A
residue 79
type
sequence I
description BINDING SITE FOR RESIDUE MPD A 7005
source : CC1

11) chain A
residue 81
type
sequence R
description BINDING SITE FOR RESIDUE MPD A 7005
source : CC1

12) chain A
residue 68
type
sequence T
description BINDING SITE FOR RESIDUE MPD G 7007
source : CC3


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