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eF-site ID
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1l9u-C |
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PDB Code
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1l9u |
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Chain
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C |
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click to enlarge
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Title
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THERMUS AQUATICUS RNA POLYMERASE HOLOENZYME AT 4 A RESOLUTION |
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Classification
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TRANSCRIPTION |
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Compound
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RNA POLYMERASE, ALPHA SUBUNIT |
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Source
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ORGANISM_SCIENTIFIC: Thermus aquaticus; |
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Sequence
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C: |
EIKRFGRIREVIPLPPLTEIQVESYKKALQADVPPEKREN
VGIQAAFKETFPIEEGLVLDFLEYRIGDPPFSQDECREKD
LTYQAPLYARLQLIHKDTGLIKEDEVFLGHLPLMTEDGSF
IINGADRVIVSQIHRSPGVYFTPDPARPGRYIASIIPLPK
RGPWIDLEVEASGVVTMKVNKRKFPLVLLLRVLGYDQETL
VRELSGLLDEAVLAMRPEEAMVRLFTLLRPGLAYLFGLLA
DPKRYDLGEAGRYKAEEKLGVGLSGRTLVFKDEVFLPTLR
YLFALTAGVPGHEVDDIDHLGNRRIRTVGELMADQFRVGL
ARLARGVRERMVMGSPDTLTPAKLVNSRPLEAALREFFSR
SQLSQFKDETNPLSSLRHKRRISALGPGGLTRERAGFDVR
DVHRTHYGRICPVETPEGANIGLITSLAAYARVDALGFIR
TPYRRVKNGVVTEEVVYMTASEEDRYTIAQANTPLEGDRI
ATDRVVARRRGEPVIVAPEEVEFMDVSPKQVFSLNTNLIP
FLEHDDANRALMGSNMQTQAVPLIRAQAPVVMTGLEERVV
RDSLAALYAEEDGEVVKVDGTRIAVRYEDGRLVHPLRRYA
RSNQGTAFDQRPRVRVGQRVDLLADGPASEEGFLALGQNV
LVAIMPFDGYNFEDAIVISEELLKRDFYTSIHIERYEIEA
RDTKLGPERITRDIPHLSEAALRDLDEEGIVRIGAEVKPG
DILVGRTSFKGEQEPSPEERLLRSIFGEKARDVKDTSLRV
PPGEGGIVVGRLRLRRGDPGVELKPGVREVVRVFVAQKRK
LQVGDKLANRHGNKGVVAKILPVEDMPHLPDGTPVDVILN
PLGVPSRMNLGQILETHLGLAGYFLGQRYISPVFDGATEP
EIKELLAEAFNLYFGKRQGEGFGVDKREKEVLARAEKLGL
VSPGKSPEEQLKELFDLGKVVLYDGRTGEPFEGPIVVGQM
FIMKLYHMVEDKMHARSTGPYSLITQQPLGGKAQFGGQRF
GEMEVWALEAYGAAHTLQEMLTIKSDDIEGRNAAYQAIIK
GEDVPEPSVPESFRVLVKELQALALDVQTLDEKDNPVDIF
EGLA
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Description
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Functional site
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1)
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chain |
C |
| residue |
836-848 |
| type |
prosite |
| sequence |
GDKLANRHGNKGV
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| description |
RNA_POL_BETA RNA polymerases beta chain signature. GdKLANrHGNKGV
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| source |
prosite : PS01166
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