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eF-site ID
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1l3u-A |
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PDB Code
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1l3u |
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Chain
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A |
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click to enlarge
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Title
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Crystal Structure of Bacillus DNA Polymerase I Fragment product complex with 11 base pairs of duplex DNA following addition of a dTTP and a dATP residue. |
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Classification
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TRANSFERASE/DNA |
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Compound
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5'-D(*GP*CP*GP*AP*TP*CP*AP*CP*GP*TP*A)-3' |
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Source
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Geobacillus stearothermophilus (Bacillus stearothermophilus) (1L3U) |
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Sequence
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A: |
AKMAFTLADRVTEEMLADKAALVVEVVEENYHDAPIVGIA
VVNEHGRFFLRPETALADPQFVAWLGDETKKKSMFDSKRA
AVALKWKGIELCGVSFDLLLAAYLLDPAQGVDDVAAAAKM
KQYEAVRPDEAVYGKGAKRAVPDEPVLAEHLVRKAAAIWE
LERPFLDELRRNEQDRLLVELEQPLSSILAEMEFAGVKVD
TKRLEQMGKELAEQLGTVEQRIYELAGQEFNINSPKQLGV
ILFEKLQLPVLKKTKTGYSTSADVLEKLAPYHEIVENILH
YRQLGKLQSTYIEGLLKVVRPDTKKVHTIFNQALTQTGRL
SSTEPNLQNIPIRLEEGRKIRQAFVPSESDWLIFAADYSQ
IELRVLAHIAEDDNLMEAFRRDLDIHTKTAMDIFQVSEDE
VTPNMRRQAKAVNFGIVYGISDYGLAQNLNISRKEAAEFI
ERYFESFPGVKRYMENIVQEAKQKGYVTTLLHRRRYLPDI
TSRNFNVRSFAERMAMNTPIQGSAADIIKKAMIDLNARLK
EERLQAHLLLQVHDELILEAPKEEMERLCRLVPEVMEQAV
TLRVPLKVDYHYGSTWYDAK
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Description
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Functional site
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1)
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chain |
A |
| residue |
702-721 |
| type |
prosite |
| sequence |
RRQAKAVNFGIVYGISDYGL
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| description |
DNA_POLYMERASE_A DNA polymerase family A signature. RrqAKavnFGivYgiSdygL
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| source |
prosite : PS00447
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