eF-site ID 1kyo-N
PDB Code 1kyo
Chain N

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Title YEAST CYTOCHROME BC1 COMPLEX WITH BOUND SUBSTRATE CYTOCHROME C
Classification OXIDOREDUCTASE/ELECTRON TRANSPORT
Compound UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX CORE PROTEIN I
Source ORGANISM_COMMON: baker's yeast; ORGANISM_SCIENTIFIC: Saccharomyces cerevisiae;
Sequence N:  MAFRKSNVYLSLVNSYIIDSPQPSSINYWWNMGSLLGLCL
VIQIVTGIFMAMHYSSNIELAFSSVEHIMRDVHNGYILRY
LHANGASFFFMVMFMHMAKGLYYGSYRSPRVTLWNVGVII
FTLTIATAFLGYCCVYGQMSHWGATVITNLFSAIPFVGND
IVSWLWGGFSVSNPTIQRFFALHYLVPFIIAAMVIMHLMA
LHIHGSSNPLGITGNLDRIPMHSYFIFKDLVTVFLFMLIL
ALFVFYSPNTLGHPDNYIPGNPLVTPASIVPEWYLLPFYA
ILRSIPDKLLGVITMFAAILVLLVLPFTDRSVVRGNTFKV
LSKFFFFIFVFNFVLLGQIGACHVEVPYVLMGQIATFIYF
AYFLIIVPVISTIENVLFYIGRVNK
Description


Functional site

1) chain N
residue 43
type
sequence Q
description BINDING SITE FOR RESIDUE HEC N 521
source : AC6

2) chain N
residue 47
type
sequence G
description BINDING SITE FOR RESIDUE HEC N 521
source : AC6

3) chain N
residue 48
type
sequence I
description BINDING SITE FOR RESIDUE HEC N 521
source : AC6

4) chain N
residue 50
type
sequence M
description BINDING SITE FOR RESIDUE HEC N 521
source : AC6

5) chain N
residue 79
type
sequence R
description BINDING SITE FOR RESIDUE HEC N 521
source : AC6

6) chain N
residue 82
type
sequence H
description BINDING SITE FOR RESIDUE HEC N 521
source : AC6

7) chain N
residue 83
type
sequence A
description BINDING SITE FOR RESIDUE HEC N 521
source : AC6

8) chain N
residue 89
type
sequence F
description BINDING SITE FOR RESIDUE HEC N 521
source : AC6

9) chain N
residue 128
type
sequence A
description BINDING SITE FOR RESIDUE HEC N 521
source : AC6

10) chain N
residue 131
type
sequence G
description BINDING SITE FOR RESIDUE HEC N 521
source : AC6

11) chain N
residue 132
type
sequence Y
description BINDING SITE FOR RESIDUE HEC N 521
source : AC6

12) chain N
residue 135
type
sequence V
description BINDING SITE FOR RESIDUE HEC N 521
source : AC6

13) chain N
residue 183
type
sequence H
description BINDING SITE FOR RESIDUE HEC N 521
source : AC6

14) chain N
residue 184
type
sequence Y
description BINDING SITE FOR RESIDUE HEC N 521
source : AC6

15) chain N
residue 187
type
sequence P
description BINDING SITE FOR RESIDUE HEC N 521
source : AC6

16) chain N
residue 30
type
sequence W
description BINDING SITE FOR RESIDUE HEC N 522
source : AC7

17) chain N
residue 33
type
sequence G
description BINDING SITE FOR RESIDUE HEC N 522
source : AC7

18) chain N
residue 36
type
sequence L
description BINDING SITE FOR RESIDUE HEC N 522
source : AC7

19) chain N
residue 96
type
sequence H
description BINDING SITE FOR RESIDUE HEC N 522
source : AC7

20) chain N
residue 99
type
sequence K
description BINDING SITE FOR RESIDUE HEC N 522
source : AC7

21) chain N
residue 105
type
sequence S
description BINDING SITE FOR RESIDUE HEC N 522
source : AC7

22) chain N
residue 113
type
sequence L
description BINDING SITE FOR RESIDUE HEC N 522
source : AC7

23) chain N
residue 114
type
sequence W
description BINDING SITE FOR RESIDUE HEC N 522
source : AC7

24) chain N
residue 117
type
sequence G
description BINDING SITE FOR RESIDUE HEC N 522
source : AC7

25) chain N
residue 194
type
sequence V
description BINDING SITE FOR RESIDUE HEC N 522
source : AC7

26) chain N
residue 197
type
sequence H
description BINDING SITE FOR RESIDUE HEC N 522
source : AC7

27) chain N
residue 201
type
sequence L
description BINDING SITE FOR RESIDUE HEC N 522
source : AC7

28) chain N
residue 206
type
sequence S
description BINDING SITE FOR RESIDUE HEC N 522
source : AC7

29) chain N
residue 207
type
sequence S
description BINDING SITE FOR RESIDUE HEC N 522
source : AC7

30) chain N
residue 122
type
sequence T
description BINDING SITE FOR RESIDUE SMA N 525
source : BC1

31) chain N
residue 125
type
sequence I
description BINDING SITE FOR RESIDUE SMA N 525
source : BC1

32) chain N
residue 126
type
sequence A
description BINDING SITE FOR RESIDUE SMA N 525
source : BC1

33) chain N
residue 129
type
sequence F
description BINDING SITE FOR RESIDUE SMA N 525
source : BC1

34) chain N
residue 130
type
sequence L
description BINDING SITE FOR RESIDUE SMA N 525
source : BC1

35) chain N
residue 139
type
sequence M
description BINDING SITE FOR RESIDUE SMA N 525
source : BC1

36) chain N
residue 146
type
sequence V
description BINDING SITE FOR RESIDUE SMA N 525
source : BC1

37) chain N
residue 147
type
sequence I
description BINDING SITE FOR RESIDUE SMA N 525
source : BC1

38) chain N
residue 269
type
sequence I
description BINDING SITE FOR RESIDUE SMA N 525
source : BC1

39) chain N
residue 271
type
sequence P
description BINDING SITE FOR RESIDUE SMA N 525
source : BC1

40) chain N
residue 272
type
sequence E
description BINDING SITE FOR RESIDUE SMA N 525
source : BC1

41) chain N
residue 279
type
sequence Y
description BINDING SITE FOR RESIDUE SMA N 525
source : BC1

42) chain N
residue 295
type
sequence M
description BINDING SITE FOR RESIDUE SMA N 525
source : BC1

43) chain N
residue 296
type
sequence F
description BINDING SITE FOR RESIDUE SMA N 525
source : BC1

44) chain N
residue 206
type catalytic
sequence S
description 208
source MCSA : MCSA2

45) chain N
residue 228
type catalytic
sequence K
description 208
source MCSA : MCSA2

46) chain N
residue 229
type catalytic
sequence D
description 208
source MCSA : MCSA2

47) chain N
residue 272
type catalytic
sequence E
description 208
source MCSA : MCSA2

48) chain N
residue 365-385
type BINDING
sequence IIVPVISTIENVLFYIGRVNK
description covalent => ECO:0000269|PubMed:11880631, ECO:0000269|PubMed:18390544, ECO:0007744|PDB:1KYO, ECO:0007744|PDB:3CX5
source Swiss-Prot : SWS_FT_FI1

49) chain N
residue 1-27
type BINDING
sequence MAFRKSNVYLSLVNSYIIDSPQPSSIN
description covalent => ECO:0000269|PubMed:11880631, ECO:0000269|PubMed:18390544, ECO:0007744|PDB:1KYO, ECO:0007744|PDB:3CX5
source Swiss-Prot : SWS_FT_FI1

50) chain N
residue 103-110
type BINDING
sequence YGSYRSPR
description covalent => ECO:0000269|PubMed:11880631, ECO:0000269|PubMed:18390544, ECO:0007744|PDB:1KYO, ECO:0007744|PDB:3CX5
source Swiss-Prot : SWS_FT_FI1

51) chain N
residue 205-223
type BINDING
sequence GSSNPLGITGNLDRIPMHS
description covalent => ECO:0000269|PubMed:11880631, ECO:0000269|PubMed:18390544, ECO:0007744|PDB:1KYO, ECO:0007744|PDB:3CX5
source Swiss-Prot : SWS_FT_FI1

52) chain N
residue 309-319
type BINDING
sequence DRSVVRGNTFK
description covalent => ECO:0000269|PubMed:11880631, ECO:0000269|PubMed:18390544, ECO:0007744|PDB:1KYO, ECO:0007744|PDB:3CX5
source Swiss-Prot : SWS_FT_FI1

53) chain N
residue 75-102
type BINDING
sequence GYILRYLHANGASFFFMVMFMHMAKGLY
description axial binding residue => ECO:0000269|PubMed:11880631, ECO:0000269|PubMed:18390544, ECO:0007744|PDB:1KYO, ECO:0007744|PDB:3CX5
source Swiss-Prot : SWS_FT_FI2

54) chain N
residue 111-135
type BINDING
sequence VTLWNVGVIIFTLTIATAFLGYCCV
description axial binding residue => ECO:0000269|PubMed:11880631, ECO:0000269|PubMed:18390544, ECO:0007744|PDB:1KYO, ECO:0007744|PDB:3CX5
source Swiss-Prot : SWS_FT_FI2

55) chain N
residue 173-204
type BINDING
sequence NPTIQRFFALHYLVPFIIAAMVIMHLMALHIH
description axial binding residue => ECO:0000269|PubMed:11880631, ECO:0000269|PubMed:18390544, ECO:0007744|PDB:1KYO, ECO:0007744|PDB:3CX5
source Swiss-Prot : SWS_FT_FI2

56) chain N
residue 224-246
type BINDING
sequence YFIFKDLVTVFLFMLILALFVFY
description axial binding residue => ECO:0000269|PubMed:11880631, ECO:0000269|PubMed:18390544, ECO:0007744|PDB:1KYO, ECO:0007744|PDB:3CX5
source Swiss-Prot : SWS_FT_FI2

57) chain N
residue 288-308
type BINDING
sequence KLLGVITMFAAILVLLVLPFT
description axial binding residue => ECO:0000269|PubMed:11880631, ECO:0000269|PubMed:18390544, ECO:0007744|PDB:1KYO, ECO:0007744|PDB:3CX5
source Swiss-Prot : SWS_FT_FI2

58) chain N
residue 320-340
type BINDING
sequence VLSKFFFFIFVFNFVLLGQIG
description axial binding residue => ECO:0000269|PubMed:11880631, ECO:0000269|PubMed:18390544, ECO:0007744|PDB:1KYO, ECO:0007744|PDB:3CX5
source Swiss-Prot : SWS_FT_FI2

59) chain N
residue 348-364
type BINDING
sequence YVLMGQIATFIYFAYFL
description axial binding residue => ECO:0000269|PubMed:11880631, ECO:0000269|PubMed:18390544, ECO:0007744|PDB:1KYO, ECO:0007744|PDB:3CX5
source Swiss-Prot : SWS_FT_FI2

60) chain N
residue 28-51
type BINDING
sequence YWWNMGSLLGLCLVIQIVTGIFMA
description axial binding residue => ECO:0000269|PubMed:11880631, ECO:0000269|PubMed:18390544, ECO:0007744|PDB:1KYO, ECO:0007744|PDB:3CX5
source Swiss-Prot : SWS_FT_FI2

61) chain N
residue 52-74
type MOD_RES
sequence MHYSSNIELAFSSVEHIMRDVHN
description N6,N6,N6-trimethyllysine; by CTM1 => ECO:0000269|PubMed:10791961, ECO:0000269|PubMed:11880631, ECO:0007744|PDB:1KYO
source Swiss-Prot : SWS_FT_FI3

62) chain N
residue 136-172
type MOD_RES
sequence YGQMSHWGATVITNLFSAIPFVGNDIVSWLWGGFSVS
description N6,N6,N6-trimethyllysine; by CTM1 => ECO:0000269|PubMed:10791961, ECO:0000269|PubMed:11880631, ECO:0007744|PDB:1KYO
source Swiss-Prot : SWS_FT_FI3

63) chain N
residue 247-287
type MOD_RES
sequence SPNTLGHPDNYIPGNPLVTPASIVPEWYLLPFYAILRSIP
D
description N6,N6,N6-trimethyllysine; by CTM1 => ECO:0000269|PubMed:10791961, ECO:0000269|PubMed:11880631, ECO:0007744|PDB:1KYO
source Swiss-Prot : SWS_FT_FI3

64) chain N
residue 341-347
type MOD_RES
sequence ACHVEVP
description N6,N6,N6-trimethyllysine; by CTM1 => ECO:0000269|PubMed:10791961, ECO:0000269|PubMed:11880631, ECO:0007744|PDB:1KYO
source Swiss-Prot : SWS_FT_FI3

65) chain N
residue 82
type BINDING
sequence H
description axial binding residue => ECO:0000269|PubMed:11880631, ECO:0000269|PubMed:18390544, ECO:0000269|PubMed:30598554, ECO:0007744|PDB:1KYO
source Swiss-Prot : SWS_FT_FI5

66) chain N
residue 96
type BINDING
sequence H
description axial binding residue => ECO:0000269|PubMed:11880631, ECO:0000269|PubMed:18390544, ECO:0000269|PubMed:30598554, ECO:0007744|PDB:1KYO
source Swiss-Prot : SWS_FT_FI5

67) chain N
residue 183
type BINDING
sequence H
description axial binding residue => ECO:0000269|PubMed:11880631, ECO:0000269|PubMed:18390544, ECO:0000269|PubMed:30598554, ECO:0007744|PDB:1KYO
source Swiss-Prot : SWS_FT_FI5

68) chain N
residue 197
type BINDING
sequence H
description axial binding residue => ECO:0000269|PubMed:11880631, ECO:0000269|PubMed:18390544, ECO:0000269|PubMed:30598554, ECO:0007744|PDB:1KYO
source Swiss-Prot : SWS_FT_FI5


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