eF-site ID 1kx5-A
PDB Code 1kx5
Chain A

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Title X-Ray Structure of the Nucleosome Core Particle, NCP147, at 1.9 A Resolution
Classification STRUCTURAL PROTEIN/DNA
Compound DNA (5'(ATCAATATCCACCTGCAGATACTACCAAAAGTGTATTTGGAAACTGCTCCATCAAAAGGCATGTTCAGCTGGAATCCAGCTGAACATGCCTTTTGATGGAGCAGTTTCCAAATACACTTTTGGTAGTATCTGCAGGTGGATATTGAT)3')
Source Bos taurus (Bovine) (1KX5)
Sequence A:  ARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHR
YRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKT
DLRFQSSAVMALQEASEAYLVALFEDTNLCAIHAKRVTIM
PKDIQLARRIRGERA
Description


Functional site

1) chain A
residue 121
type
sequence P
description BINDING SITE FOR RESIDUE CL A 3147
source : BC8

2) chain A
residue 122
type
sequence K
description BINDING SITE FOR RESIDUE CL A 3147
source : BC8

3) chain A
residue 87
type MOD_RES
sequence S
description Phosphoserine => ECO:0000250|UniProtKB:P84243
source Swiss-Prot : SWS_FT_FI18

4) chain A
residue 116
type MOD_RES
sequence R
description N6-glutaryllysine; alternate => ECO:0000250|UniProtKB:Q71DI3
source Swiss-Prot : SWS_FT_FI19

5) chain A
residue 123
type MOD_RES
sequence D
description N6-succinyllysine; alternate => ECO:0000250|UniProtKB:Q71DI3
source Swiss-Prot : SWS_FT_FI20

6) chain A
residue 111
type LIPID
sequence A
description S-palmitoyl cysteine => ECO:0000250|UniProtKB:Q71DI3
source Swiss-Prot : SWS_FT_FI21

7) chain A
residue 29
type CROSSLNK
sequence A
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin); alternate => ECO:0000250|UniProtKB:P62805
source Swiss-Prot : SWS_FT_FI13

8) chain A
residue 38
type MOD_RES
sequence P
description N6-methyllysine => ECO:0000250|UniProtKB:P68431
source Swiss-Prot : SWS_FT_FI14

9) chain A
residue 42
type MOD_RES
sequence R
description Phosphotyrosine => ECO:0000250|UniProtKB:Q71DI3
source Swiss-Prot : SWS_FT_FI15

10) chain A
residue 58
type MOD_RES
sequence T
description Phosphoserine => ECO:0000250|UniProtKB:Q71DI3
source Swiss-Prot : SWS_FT_FI16

11) chain A
residue 81
type MOD_RES
sequence D
description Phosphothreonine => ECO:0000250|UniProtKB:Q71DI3
source Swiss-Prot : SWS_FT_FI17

12) chain A
residue 108
type MOD_RES
sequence N
description Phosphothreonine => ECO:0000250|UniProtKB:Q71DI3
source Swiss-Prot : SWS_FT_FI17

13) chain A
residue 14-20
type prosite
sequence KAPRKQL
description HISTONE_H3_1 Histone H3 signature 1. KAPRKQL
source prosite : PS00322

14) chain A
residue 66-74
type prosite
sequence PFQRLVREI
description HISTONE_H3_2 Histone H3 signature 2. PFqRLVREI
source prosite : PS00959


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