|
|
eF-site ID
|
1kx3-D |
|
PDB Code
|
1kx3 |
|
Chain
|
D |
|
click to enlarge
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Title
|
X-Ray Structure of the Nucleosome Core Particle, NCP146, at 2.0 A Resolution |
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Classification
|
STRUCTURAL PROTEIN/DNA |
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Compound
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DNA (5'(ATCAATATCCACCTGCAGATTCTACCAAAAGTGTATTTGGAAACTGCTCCATCAAAAGGCATGTTCAGCTGAATTCAGCTGAACATGCCTTTTGATGGAGCAGTTTCCAAATACACTTTTGGTAGAATCTGCAGGTGGATATTGAT)3') |
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Source
|
Xenopus laevis (African clawed frog) (1KX3) |
|
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Sequence
|
D: |
TRKESYAIYVYKVLKQVHPDTGISSKAMSIMNSFVNDVFE
RIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAV
SEGTKAVTKYTSAK
|
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Description
|
|
Functional site
|
|
|
1)
|
chain |
D |
| residue |
45 |
| type |
|
| sequence |
V
|
| description |
BINDING SITE FOR RESIDUE MN E 946
|
| source |
: AC3
|
|
|
2)
|
chain |
D |
| residue |
89-111 |
| type |
prosite |
| sequence |
REIQTAVRLLLPGELAKHAVSEG
|
| description |
HISTONE_H2B Histone H2B signature. REIQTavRlLLpGELaKHAVSEG
|
| source |
prosite : PS00357
|
|
|
3)
|
chain |
D |
| residue |
110 |
| type |
CARBOHYD |
| sequence |
E
|
| description |
O-linked (GlcNAc) serine => ECO:0000250|UniProtKB:P62807
|
| source |
Swiss-Prot : SWS_FT_FI3
|
|
|
4)
|
chain |
D |
| residue |
118 |
| type |
CROSSLNK |
| sequence |
Y
|
| description |
Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000250|UniProtKB:P0C1H4
|
| source |
Swiss-Prot : SWS_FT_FI4
|
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|