|
eF-site ID
|
1ku7-AD |
PDB Code
|
1ku7 |
Chain
|
A, D |
|
click to enlarge
|
|
Title
|
Crystal Structure of Thermus aquatics RNA Polymerase SigmaA Subunit Region 4 Bound to-35 Element DNA |
Classification
|
TRANSCRIPTION/DNA |
Compound
|
5'-D(*CP*CP*TP*TP*GP*AP*CP*AP*AP*AP*G)-3' |
Source
|
Thermus aquaticus (1KU7) |
|
Sequence
|
A: |
SEELEKALSKLSEREAMVLKMRKGLIDGREHTLEEVGAYF
GVTRERIRQIENKALRKLKYHESRTRKLRDFLE
|
D: |
KALSKLSEREAMVLKMRKGLIDGREHTLEEVGAYFGVTRE
RIRQIENKALRKLKYHESRTRKLRDFLE
|
|
Description
|
|
Functional site
|
|
1)
|
chain |
A |
residue |
397-423 |
type |
prosite |
sequence |
TLEEVGAYFGVTRERIRQIENKALRKL
|
description |
SIGMA70_2 Sigma-70 factors family signature 2. TleEVGayfgVTrerIrQIEnkaLrkL
|
source |
prosite : PS00716
|
|
2)
|
chain |
A |
residue |
398-417 |
type |
DNA_BIND |
sequence |
LEEVGAYFGVTRERIRQIEN
|
description |
H-T-H motif => ECO:0000255|HAMAP-Rule:MF_00963
|
source |
Swiss-Prot : SWS_FT_FI1
|
|
3)
|
chain |
D |
residue |
398-417 |
type |
DNA_BIND |
sequence |
LEEVGAYFGVTRERIRQIEN
|
description |
H-T-H motif => ECO:0000255|HAMAP-Rule:MF_00963
|
source |
Swiss-Prot : SWS_FT_FI1
|
|
|
|