eF-site ID 1kt2-ABCD PDB Code 1kt2 Chain A, B, C, D click to enlarge Title CRYSTAL STRUCTURE OF CLASS II MHC MOLECULE IEK BOUND TO MOTH CYTOCHROME C PEPTIDE Classification IMMUNE SYSTEM Compound H-2 class II histocompatibility antigen, E-D alpha chain Source Mus musculus (Mouse) (AAA39593) Sequence A:  IKEEHTIIQAEFYLLPDKRGEFMFDFDGDEIFHVDIEKSE TIWRLEEFAKFASFEAQGALANIAVDKANLDVMKERSNNT PDANVAPEVTVLSRSPVNLGEPNILICFIDKFSPPVVNVT WLRNGRPVTEGVSETVFLPRDDHLFRKFHYLTFLPSTDDF YDCEVDHWGLEEPLRKHWEFEE B:  ADLIAYLKQATKGGGGSLVPRGSGGGGSRPWFLEYCKSEC HFYNGTQRVRLLVRYFYNLEENLRFDSDVGEFRAVTELGR PDAENWNSQPEFLEQKRAEVDTVCRHNYEIFDNFLVPRRV EPTVTVYPTKTQPLEHHNLLVCSVSDFYPGNIEVRWFRNG KEEKTGIVSTGLVRNGDWTFQTLVMLETVPQSGEVYTCQV EHPSLTDPVTVEW C:  IKEEHTIIQAEFYLLPDKRGEFMFDFDGDEIFHVDIEKSE TIWRLEEFAKFASFEAQGALANIAVDKANLDVMKERSNNT PDANVAPEVTVLSRSPVNLGEPNILICFIDKFSPPVVNVT WLRNGRPVTEGVSETVFLPRDDHLFRKFHYLTFLPSTDDF YDCEVDHWGLEEPLRKHWEFEE D:  ADLIAYLKQATKGGGGSLVPRGSGGGGSRPWFLEYCKSEC HFYNGTQRVRLLVRYFYNLEENLRFDSDVGEFRAVTELGR PDAENWNSQPEFLEQKRAEVDTVCRHNYEIFDNFLVPRRV EPTVTVYPTKTQPLEHHNLLVCSVSDFYPGNIEVRWFRNG KEEKTGIVSTGLVRNGDWTFQTLVMLETVPQSGEVYTCQV EHPSLTDPVTVEW Description (1)  H-2 class II histocompatibility antigen, E-D alpha chain, Fusion protein consisting of cytochrome C peptide, glycine rich linker, and MHC E-beta-k Functional site 1) chain B residue 46 type CARBOHYD sequence N description N-linked (GlcNAc...) asparagine => ECO:0000255 source Swiss-Prot : SWS_FT_FI1 2) chain D residue 46 type CARBOHYD sequence N description N-linked (GlcNAc...) asparagine => ECO:0000255 source Swiss-Prot : SWS_FT_FI1 3) chain B residue 198-204 type prosite sequence YTCQVEH description IG_MHC Immunoglobulins and major histocompatibility complex proteins signature. YTCQVEH source prosite : PS00290 4) chain A residue 161-167 type prosite sequence YDCEVDH description IG_MHC Immunoglobulins and major histocompatibility complex proteins signature. YTCQVEH source prosite : PS00290

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