eF-site ID 1km7-A
PDB Code 1km7
Chain A

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Title Solution Structure and Backbone Dynamics of GABARAP, GABAA Receptor Associated Protein
Classification PROTEIN BINDING
Compound GABA(A) Receptor Associated Protein
Source Homo sapiens (Human) (GBRAP_HUMAN)
Sequence A:  GEKIRKKYPDRVPVIVEKAPKARIGDLDKKKYLVPSDLTV
GQFYFLIRKRIHLRAEDALFFFVNNVIPPTSATMGQLYQE
HHEEDFFLYIAYSDESVYGL
Description


Functional site

1) chain A
residue 28
type SITE
sequence R
description Interaction with LIR (LC3 nteracting Region) motif of ATG3 => ECO:0000269|PubMed:37252361, ECO:0007744|PDB:8AFI
source Swiss-Prot : SWS_FT_FI1

2) chain A
residue 116
type SITE
sequence G
description Cleavage; by ATG4B => ECO:0000269|PubMed:15169837
source Swiss-Prot : SWS_FT_FI2

3) chain A
residue 116
type LIPID
sequence G
description Phosphatidylserine amidated glycine; alternate => ECO:0000269|PubMed:33909989
source Swiss-Prot : SWS_FT_FI3


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