eF-site ID 1kjq-AB
PDB Code 1kjq
Chain A, B

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Title Crystal structure of glycinamide ribonucleotide transformylase in complex with Mg-ADP
Classification TRANSFERASE
Compound phosphoribosylglycinamide formyltransferase 2
Source Escherichia coli (strain K12) (PURT_ECOLI)
Sequence A:  TLLGTALRPAATRVMLLGSGELGKEVAIECQRLGVEVIAV
DRYADAPAMHVAHRSHVINMLDGDALRRVVELEKPHYIVP
EIEAIATDMLIQLEEEGLNVVPCARATKLTMNREGIRRLA
AEELQLPTSTYRFADSESLFREAVADIGYPCIVKPVMSKG
QTFIRSAEQLAQAWKYAQQGGRAGAGRVIVEGVVKFDFEI
TLLTVSAVDGVHFCAPVGHRQEDGDYRESWQPQQMSPLAL
ERAQEIARKVVLALGGYGLFGVELFVCGDEVIFSEVSPRP
HDTGMVTLISQDLSEFALHVRAFLGLPVGGIRQYGPAASA
VILPQLTSQNVTFDNVQNAVGADLQIRLFGKPEIDGSRRL
GVALATAESVVDAIERAKHAAGQVKVQG
B:  TLLGTALRPAATRVMLLGSGELGKEVAIECQRLGVEVIAV
DRYADAPAMHVAHRSHVINMLDGDALRRVVELEKPHYIVP
EIEAIATDMLIQLEEEGLNVVPCARATKLTMNREGIRRLA
AEELQLPTSTYRFADSESLFREAVADIGYPCIVKPVMSGQ
TFIRSAEQLAQAWKYAQQGAGAGRVIVEGVVKFDFEITLL
TVSAVDGVHFCAPVGHRQEDGDYRESWQPQQMSPLALERA
QEIARKVVLALGGYGLFGVELFVCGDEVIFSEVSPRPHDT
GMVTLISQDLSEFALHVRAFLGLPVGGIRQYGPAASAVIL
PQLTSQNVTFDNVQNAVGADLQIRLFGKPEIDGSRRLGVA
LATAESVVDAIERAKHAAGQVKVQG
Description


Functional site

1) chain A
residue 267
type
sequence E
description BINDING SITE FOR RESIDUE MG A 393
source : AC1

2) chain A
residue 279
type
sequence E
description BINDING SITE FOR RESIDUE MG A 393
source : AC1

3) chain B
residue 267
type
sequence E
description BINDING SITE FOR RESIDUE MG B 393
source : AC2

4) chain B
residue 279
type
sequence E
description BINDING SITE FOR RESIDUE MG B 393
source : AC2

5) chain A
residue 53
type
sequence A
description BINDING SITE FOR RESIDUE NA B 394
source : AC3

6) chain B
residue 50
type
sequence M
description BINDING SITE FOR RESIDUE NA B 394
source : AC3

7) chain B
residue 51
type
sequence H
description BINDING SITE FOR RESIDUE NA B 394
source : AC3

8) chain A
residue 100
type
sequence N
description BINDING SITE FOR RESIDUE NA A 394
source : AC4

9) chain A
residue 101
type
sequence V
description BINDING SITE FOR RESIDUE NA A 394
source : AC4

10) chain A
residue 103
type
sequence P
description BINDING SITE FOR RESIDUE NA A 394
source : AC4

11) chain A
residue 43
type
sequence R
description BINDING SITE FOR RESIDUE CL A 395
source : AC5

12) chain A
residue 58
type
sequence V
description BINDING SITE FOR RESIDUE CL A 395
source : AC5

13) chain A
residue 119
type
sequence R
description BINDING SITE FOR RESIDUE CL A 395
source : AC5

14) chain A
residue 133
type
sequence R
description BINDING SITE FOR RESIDUE CL A 395
source : AC5

15) chain A
residue 134
type
sequence F
description BINDING SITE FOR RESIDUE CL A 395
source : AC5

16) chain A
residue 43
type
sequence R
description BINDING SITE FOR RESIDUE CL A 396
source : AC6

17) chain A
residue 131
type
sequence T
description BINDING SITE FOR RESIDUE CL A 396
source : AC6

18) chain A
residue 132
type
sequence Y
description BINDING SITE FOR RESIDUE CL A 396
source : AC6

19) chain B
residue 216
type
sequence H
description BINDING SITE FOR RESIDUE CL B 395
source : AC7

20) chain B
residue 217
type
sequence F
description BINDING SITE FOR RESIDUE CL B 395
source : AC7

21) chain B
residue 337
type
sequence F
description BINDING SITE FOR RESIDUE CL B 396
source : AC8

22) chain B
residue 354
type
sequence G
description BINDING SITE FOR RESIDUE CL B 396
source : AC8

23) chain A
residue 114
type
sequence R
description BINDING SITE FOR RESIDUE ADP A 1
source : AC9

24) chain A
residue 130
type
sequence S
description BINDING SITE FOR RESIDUE ADP A 1
source : AC9

25) chain A
residue 153
type
sequence I
description BINDING SITE FOR RESIDUE ADP A 1
source : AC9

26) chain A
residue 155
type
sequence K
description BINDING SITE FOR RESIDUE ADP A 1
source : AC9

27) chain A
residue 165
type
sequence Q
description BINDING SITE FOR RESIDUE ADP A 1
source : AC9

28) chain A
residue 195
type
sequence E
description BINDING SITE FOR RESIDUE ADP A 1
source : AC9

29) chain A
residue 196
type
sequence G
description BINDING SITE FOR RESIDUE ADP A 1
source : AC9

30) chain A
residue 197
type
sequence V
description BINDING SITE FOR RESIDUE ADP A 1
source : AC9

31) chain A
residue 198
type
sequence V
description BINDING SITE FOR RESIDUE ADP A 1
source : AC9

32) chain A
residue 200
type
sequence F
description BINDING SITE FOR RESIDUE ADP A 1
source : AC9

33) chain A
residue 203
type
sequence E
description BINDING SITE FOR RESIDUE ADP A 1
source : AC9

34) chain A
residue 225
type
sequence Q
description BINDING SITE FOR RESIDUE ADP A 1
source : AC9

35) chain A
residue 267
type
sequence E
description BINDING SITE FOR RESIDUE ADP A 1
source : AC9

36) chain A
residue 269
type
sequence F
description BINDING SITE FOR RESIDUE ADP A 1
source : AC9

37) chain A
residue 279
type
sequence E
description BINDING SITE FOR RESIDUE ADP A 1
source : AC9

38) chain B
residue 114
type
sequence R
description BINDING SITE FOR RESIDUE ADP B 397
source : BC1

39) chain B
residue 130
type
sequence S
description BINDING SITE FOR RESIDUE ADP B 397
source : BC1

40) chain B
residue 153
type
sequence I
description BINDING SITE FOR RESIDUE ADP B 397
source : BC1

41) chain B
residue 155
type
sequence K
description BINDING SITE FOR RESIDUE ADP B 397
source : BC1

42) chain B
residue 165
type
sequence Q
description BINDING SITE FOR RESIDUE ADP B 397
source : BC1

43) chain B
residue 195
type
sequence E
description BINDING SITE FOR RESIDUE ADP B 397
source : BC1

44) chain B
residue 196
type
sequence G
description BINDING SITE FOR RESIDUE ADP B 397
source : BC1

45) chain B
residue 198
type
sequence V
description BINDING SITE FOR RESIDUE ADP B 397
source : BC1

46) chain B
residue 203
type
sequence E
description BINDING SITE FOR RESIDUE ADP B 397
source : BC1

47) chain B
residue 225
type
sequence Q
description BINDING SITE FOR RESIDUE ADP B 397
source : BC1

48) chain B
residue 267
type
sequence E
description BINDING SITE FOR RESIDUE ADP B 397
source : BC1

49) chain B
residue 269
type
sequence F
description BINDING SITE FOR RESIDUE ADP B 397
source : BC1

50) chain B
residue 279
type
sequence E
description BINDING SITE FOR RESIDUE ADP B 397
source : BC1

51) chain A
residue 46
type
sequence D
description BINDING SITE FOR RESIDUE MPO A 397
source : BC2

52) chain A
residue 50
type
sequence M
description BINDING SITE FOR RESIDUE MPO A 397
source : BC2

53) chain A
residue 51
type
sequence H
description BINDING SITE FOR RESIDUE MPO A 397
source : BC2

54) chain A
residue 55
type
sequence R
description BINDING SITE FOR RESIDUE MPO A 397
source : BC2

55) chain A
residue 56
type
sequence S
description BINDING SITE FOR RESIDUE MPO A 397
source : BC2

56) chain A
residue 143
type
sequence E
description BINDING SITE FOR RESIDUE MPO A 397
source : BC2

57) chain B
residue 8
type
sequence L
description BINDING SITE FOR RESIDUE MPO A 397
source : BC2

58) chain B
residue 54
type
sequence H
description BINDING SITE FOR RESIDUE MPO A 397
source : BC2

59) chain A
residue 34
type
sequence L
description BINDING SITE FOR RESIDUE EDO A 398
source : BC3

60) chain A
residue 305
type
sequence R
description BINDING SITE FOR RESIDUE EDO A 398
source : BC3

61) chain B
residue 349
type
sequence Q
description BINDING SITE FOR RESIDUE EDO A 398
source : BC3

62) chain B
residue 350
type
sequence I
description BINDING SITE FOR RESIDUE EDO A 398
source : BC3

63) chain B
residue 30
type
sequence E
description BINDING SITE FOR RESIDUE EDO B 398
source : BC4

64) chain B
residue 33
type
sequence R
description BINDING SITE FOR RESIDUE EDO B 398
source : BC4

65) chain B
residue 296
type
sequence D
description BINDING SITE FOR RESIDUE EDO B 398
source : BC4

66) chain B
residue 297
type
sequence L
description BINDING SITE FOR RESIDUE EDO B 398
source : BC4

67) chain B
residue 298
type
sequence S
description BINDING SITE FOR RESIDUE EDO B 398
source : BC4

68) chain B
residue 301
type
sequence A
description BINDING SITE FOR RESIDUE EDO B 398
source : BC4

69) chain A
residue 378
type
sequence I
description BINDING SITE FOR RESIDUE EDO A 399
source : BC5

70) chain B
residue 21
type
sequence G
description BINDING SITE FOR RESIDUE EDO B 399
source : BC6

71) chain B
residue 22
type
sequence E
description BINDING SITE FOR RESIDUE EDO B 399
source : BC6

72) chain B
residue 23
type
sequence L
description BINDING SITE FOR RESIDUE EDO B 399
source : BC6

73) chain B
residue 24
type
sequence G
description BINDING SITE FOR RESIDUE EDO B 399
source : BC6

74) chain B
residue 82
type
sequence E
description BINDING SITE FOR RESIDUE EDO B 399
source : BC6

75) chain A
residue 246
type
sequence R
description BINDING SITE FOR RESIDUE EDO A 400
source : BC7

76) chain A
residue 274
type
sequence E
description BINDING SITE FOR RESIDUE EDO A 400
source : BC7

77) chain A
residue 275
type
sequence V
description BINDING SITE FOR RESIDUE EDO A 400
source : BC7

78) chain A
residue 69
type
sequence R
description BINDING SITE FOR RESIDUE EDO A 401
source : BC8

79) chain A
residue 2
type
sequence T
description BINDING SITE FOR RESIDUE EDO A 402
source : BC9

80) chain A
residue 3
type
sequence L
description BINDING SITE FOR RESIDUE EDO A 402
source : BC9

81) chain A
residue 78
type
sequence Y
description BINDING SITE FOR RESIDUE EDO A 402
source : BC9

82) chain B
residue 328
type
sequence P
description BINDING SITE FOR RESIDUE EDO B 400
source : CC1

83) chain B
residue 329
type
sequence Q
description BINDING SITE FOR RESIDUE EDO B 400
source : CC1

84) chain B
residue 330
type
sequence L
description BINDING SITE FOR RESIDUE EDO B 400
source : CC1

85) chain B
residue 390
type
sequence V
description BINDING SITE FOR RESIDUE EDO B 400
source : CC1

86) chain A
residue 60
type
sequence N
description BINDING SITE FOR RESIDUE EDO A 403
source : CC2

87) chain A
residue 63
type
sequence D
description BINDING SITE FOR RESIDUE EDO A 403
source : CC2

88) chain A
residue 122
type
sequence A
description BINDING SITE FOR RESIDUE EDO A 403
source : CC2

89) chain A
residue 129
type
sequence T
description BINDING SITE FOR RESIDUE EDO A 403
source : CC2

90) chain A
residue 132
type
sequence Y
description BINDING SITE FOR RESIDUE EDO A 403
source : CC2

91) chain A
residue 379
type
sequence E
description BINDING SITE FOR RESIDUE EDO A 404
source : CC3

92) chain A
residue 383
type
sequence H
description BINDING SITE FOR RESIDUE EDO A 404
source : CC3

93) chain A
residue 231
type
sequence R
description BINDING SITE FOR RESIDUE EDO A 405
source : CC4

94) chain B
residue 134
type
sequence F
description BINDING SITE FOR RESIDUE EDO B 401
source : CC5

95) chain B
residue 135
type
sequence A
description BINDING SITE FOR RESIDUE EDO B 401
source : CC5

96) chain B
residue 140
type
sequence L
description BINDING SITE FOR RESIDUE EDO B 401
source : CC5

97) chain B
residue 144
type
sequence A
description BINDING SITE FOR RESIDUE EDO B 401
source : CC5

98) chain B
residue 244
type
sequence L
description BINDING SITE FOR RESIDUE EDO B 402
source : CC6

99) chain B
residue 245
type
sequence E
description BINDING SITE FOR RESIDUE EDO B 402
source : CC6

100) chain B
residue 248
type
sequence Q
description BINDING SITE FOR RESIDUE EDO B 402
source : CC6

101) chain A
residue 292
type
sequence L
description BINDING SITE FOR RESIDUE EDO A 406
source : CC7

102) chain A
residue 293
type
sequence I
description BINDING SITE FOR RESIDUE EDO A 406
source : CC7

103) chain A
residue 349
type
sequence Q
description BINDING SITE FOR RESIDUE EDO A 406
source : CC7

104) chain A
residue 351
type
sequence R
description BINDING SITE FOR RESIDUE EDO A 406
source : CC7

105) chain B
residue 296
type
sequence D
description BINDING SITE FOR RESIDUE EDO A 406
source : CC7

106) chain A
residue 64
type
sequence G
description BINDING SITE FOR RESIDUE EDO A 407
source : CC8

107) chain A
residue 87
type
sequence A
description BINDING SITE FOR RESIDUE EDO A 407
source : CC8

108) chain A
residue 90
type
sequence M
description BINDING SITE FOR RESIDUE EDO A 407
source : CC8

109) chain A
residue 93
type
sequence Q
description BINDING SITE FOR RESIDUE EDO A 407
source : CC8

110) chain A
residue 163
type catalytic
sequence K
description 665
source MCSA : MCSA1

111) chain A
residue 268
type catalytic
sequence L
description 665
source MCSA : MCSA1

112) chain A
residue 280
type catalytic
sequence V
description 665
source MCSA : MCSA1

113) chain A
residue 287
type catalytic
sequence T
description 665
source MCSA : MCSA1

114) chain A
residue 288
type catalytic
sequence G
description 665
source MCSA : MCSA1

115) chain A
residue 364
type catalytic
sequence L
description 665
source MCSA : MCSA1

116) chain B
residue 268
type catalytic
sequence L
description 665
source MCSA : MCSA2

117) chain B
residue 280
type catalytic
sequence V
description 665
source MCSA : MCSA2

118) chain B
residue 287
type catalytic
sequence T
description 665
source MCSA : MCSA2

119) chain B
residue 288
type catalytic
sequence G
description 665
source MCSA : MCSA2

120) chain B
residue 364
type catalytic
sequence L
description 665
source MCSA : MCSA2

121) chain A
residue 23
type BINDING
sequence L
description BINDING => ECO:0000255|HAMAP-Rule:MF_01643, ECO:0000269|PubMed:10913290, ECO:0000269|PubMed:11953435
source Swiss-Prot : SWS_FT_FI1

122) chain A
residue 287
type BINDING
sequence T
description BINDING => ECO:0000255|HAMAP-Rule:MF_01643, ECO:0000269|PubMed:10913290, ECO:0000269|PubMed:11953435
source Swiss-Prot : SWS_FT_FI1

123) chain A
residue 356
type BINDING
sequence P
description BINDING => ECO:0000255|HAMAP-Rule:MF_01643, ECO:0000269|PubMed:10913290, ECO:0000269|PubMed:11953435
source Swiss-Prot : SWS_FT_FI1

124) chain A
residue 363
type BINDING
sequence R
description BINDING => ECO:0000255|HAMAP-Rule:MF_01643, ECO:0000269|PubMed:10913290, ECO:0000269|PubMed:11953435
source Swiss-Prot : SWS_FT_FI1

125) chain B
residue 23
type BINDING
sequence L
description BINDING => ECO:0000255|HAMAP-Rule:MF_01643, ECO:0000269|PubMed:10913290, ECO:0000269|PubMed:11953435
source Swiss-Prot : SWS_FT_FI1

126) chain B
residue 83
type BINDING
sequence I
description BINDING => ECO:0000255|HAMAP-Rule:MF_01643, ECO:0000269|PubMed:10913290, ECO:0000269|PubMed:11953435
source Swiss-Prot : SWS_FT_FI1

127) chain B
residue 115
type BINDING
sequence E
description BINDING => ECO:0000255|HAMAP-Rule:MF_01643, ECO:0000269|PubMed:10913290, ECO:0000269|PubMed:11953435
source Swiss-Prot : SWS_FT_FI1

128) chain B
residue 156
type BINDING
sequence P
description BINDING => ECO:0000255|HAMAP-Rule:MF_01643, ECO:0000269|PubMed:10913290, ECO:0000269|PubMed:11953435
source Swiss-Prot : SWS_FT_FI1

129) chain B
residue 196
type BINDING
sequence G
description BINDING => ECO:0000255|HAMAP-Rule:MF_01643, ECO:0000269|PubMed:10913290, ECO:0000269|PubMed:11953435
source Swiss-Prot : SWS_FT_FI1

130) chain B
residue 204
type BINDING
sequence I
description BINDING => ECO:0000255|HAMAP-Rule:MF_01643, ECO:0000269|PubMed:10913290, ECO:0000269|PubMed:11953435
source Swiss-Prot : SWS_FT_FI1

131) chain A
residue 83
type BINDING
sequence I
description BINDING => ECO:0000255|HAMAP-Rule:MF_01643, ECO:0000269|PubMed:10913290, ECO:0000269|PubMed:11953435
source Swiss-Prot : SWS_FT_FI1

132) chain B
residue 268
type BINDING
sequence L
description BINDING => ECO:0000255|HAMAP-Rule:MF_01643, ECO:0000269|PubMed:10913290, ECO:0000269|PubMed:11953435
source Swiss-Prot : SWS_FT_FI1

133) chain B
residue 280
type BINDING
sequence V
description BINDING => ECO:0000255|HAMAP-Rule:MF_01643, ECO:0000269|PubMed:10913290, ECO:0000269|PubMed:11953435
source Swiss-Prot : SWS_FT_FI1

134) chain B
residue 287
type BINDING
sequence T
description BINDING => ECO:0000255|HAMAP-Rule:MF_01643, ECO:0000269|PubMed:10913290, ECO:0000269|PubMed:11953435
source Swiss-Prot : SWS_FT_FI1

135) chain B
residue 356
type BINDING
sequence P
description BINDING => ECO:0000255|HAMAP-Rule:MF_01643, ECO:0000269|PubMed:10913290, ECO:0000269|PubMed:11953435
source Swiss-Prot : SWS_FT_FI1

136) chain B
residue 363
type BINDING
sequence R
description BINDING => ECO:0000255|HAMAP-Rule:MF_01643, ECO:0000269|PubMed:10913290, ECO:0000269|PubMed:11953435
source Swiss-Prot : SWS_FT_FI1

137) chain A
residue 115
type BINDING
sequence E
description BINDING => ECO:0000255|HAMAP-Rule:MF_01643, ECO:0000269|PubMed:10913290, ECO:0000269|PubMed:11953435
source Swiss-Prot : SWS_FT_FI1

138) chain A
residue 156
type BINDING
sequence P
description BINDING => ECO:0000255|HAMAP-Rule:MF_01643, ECO:0000269|PubMed:10913290, ECO:0000269|PubMed:11953435
source Swiss-Prot : SWS_FT_FI1

139) chain A
residue 196
type BINDING
sequence G
description BINDING => ECO:0000255|HAMAP-Rule:MF_01643, ECO:0000269|PubMed:10913290, ECO:0000269|PubMed:11953435
source Swiss-Prot : SWS_FT_FI1

140) chain A
residue 204
type BINDING
sequence I
description BINDING => ECO:0000255|HAMAP-Rule:MF_01643, ECO:0000269|PubMed:10913290, ECO:0000269|PubMed:11953435
source Swiss-Prot : SWS_FT_FI1

141) chain A
residue 268
type BINDING
sequence L
description BINDING => ECO:0000255|HAMAP-Rule:MF_01643, ECO:0000269|PubMed:10913290, ECO:0000269|PubMed:11953435
source Swiss-Prot : SWS_FT_FI1

142) chain A
residue 280
type BINDING
sequence V
description BINDING => ECO:0000255|HAMAP-Rule:MF_01643, ECO:0000269|PubMed:10913290, ECO:0000269|PubMed:11953435
source Swiss-Prot : SWS_FT_FI1

143) chain A
residue 180
type MOD_RES
sequence Y
description N6-acetyllysine => ECO:0000269|PubMed:18723842
source Swiss-Prot : SWS_FT_FI2

144) chain B
residue 180
type MOD_RES
sequence Y
description N6-acetyllysine => ECO:0000269|PubMed:18723842
source Swiss-Prot : SWS_FT_FI2


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