eF-site ID 1ki8-B
PDB Code 1ki8
Chain B

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Title CRYSTAL STRUCTURE OF THYMIDINE KINASE FROM HERPES SIMPLEX VIRUS TYPE I COMPLEXED WITH 5-BROMOVINYLDEOXYURIDINE
Classification PHOSPHOTRANSFERASE
Compound THYMIDINE KINASE
Source Human herpesvirus 1 (strain 17) (HHV-1) (Human herpes simplex virus 1) (KITH_HSV11)
Sequence B:  MPTLLRVYIDGPHGMGKTTTTQLLVALGDIVYVPEPMTYW
RVLGASETIANIYTTQHRLDQGEISAGDAAVVMTSAQITM
GMPYAVTDAVLAPHIGGEAGSSAPPPALTLIFDRHPIAAL
LCYPAARYLMGSMTPQAVLAFVALIPPTLPGTNIVLGALP
EDRHIDRLAKRQRPGERLDLAMLAAIRRVYGLLANTVRYL
QCGGSWREDWGQLSNAGPRPHIGDTLFTLFRAPELLAPNG
DLYNVFAWALDVLAKRLRSMHVFILDYDQSPAGCRDALLQ
LTSGMVQTHVTTPGSIPTICDLARTFAREMGE
Description


Functional site

1) chain B
residue 59
type
sequence G
description BINDING SITE FOR RESIDUE SO4 B 4
source : AC2

2) chain B
residue 60
type
sequence M
description BINDING SITE FOR RESIDUE SO4 B 4
source : AC2

3) chain B
residue 61
type
sequence G
description BINDING SITE FOR RESIDUE SO4 B 4
source : AC2

4) chain B
residue 62
type
sequence K
description BINDING SITE FOR RESIDUE SO4 B 4
source : AC2

5) chain B
residue 63
type
sequence T
description BINDING SITE FOR RESIDUE SO4 B 4
source : AC2

6) chain B
residue 58
type
sequence H
description BINDING SITE FOR RESIDUE BVD B 2
source : AC4

7) chain B
residue 83
type
sequence E
description BINDING SITE FOR RESIDUE BVD B 2
source : AC4

8) chain B
residue 100
type
sequence I
description BINDING SITE FOR RESIDUE BVD B 2
source : AC4

9) chain B
residue 101
type
sequence Y
description BINDING SITE FOR RESIDUE BVD B 2
source : AC4

10) chain B
residue 125
type
sequence Q
description BINDING SITE FOR RESIDUE BVD B 2
source : AC4

11) chain B
residue 128
type
sequence M
description BINDING SITE FOR RESIDUE BVD B 2
source : AC4

12) chain B
residue 132
type
sequence Y
description BINDING SITE FOR RESIDUE BVD B 2
source : AC4

13) chain B
residue 167
type
sequence A
description BINDING SITE FOR RESIDUE BVD B 2
source : AC4

14) chain B
residue 168
type
sequence A
description BINDING SITE FOR RESIDUE BVD B 2
source : AC4

15) chain B
residue 172
type
sequence Y
description BINDING SITE FOR RESIDUE BVD B 2
source : AC4

16) chain B
residue 222
type
sequence R
description BINDING SITE FOR RESIDUE BVD B 2
source : AC4

17) chain B
residue 225
type
sequence E
description BINDING SITE FOR RESIDUE BVD B 2
source : AC4

18) chain B
residue 62
type catalytic
sequence K
description 588
source MCSA : MCSA2

19) chain B
residue 83
type catalytic
sequence E
description 588
source MCSA : MCSA2

20) chain B
residue 162
type catalytic
sequence D
description 588
source MCSA : MCSA2

21) chain B
residue 163
type catalytic
sequence R
description 588
source MCSA : MCSA2

22) chain B
residue 220
type catalytic
sequence R
description 588
source MCSA : MCSA2

23) chain B
residue 222
type catalytic
sequence R
description 588
source MCSA : MCSA2

24) chain B
residue 225
type catalytic
sequence E
description 588
source MCSA : MCSA2

25) chain B
residue 83
type ACT_SITE
sequence E
description Proton acceptor => ECO:0000255|HAMAP-Rule:MF_04029
source Swiss-Prot : SWS_FT_FI1

26) chain B
residue 222
type BINDING
sequence R
description BINDING => ECO:0000255|HAMAP-Rule:MF_04029
source Swiss-Prot : SWS_FT_FI2

27) chain B
residue 56
type BINDING
sequence G
description BINDING => ECO:0000255|HAMAP-Rule:MF_04029
source Swiss-Prot : SWS_FT_FI2

28) chain B
residue 101
type BINDING
sequence Y
description BINDING => ECO:0000255|HAMAP-Rule:MF_04029
source Swiss-Prot : SWS_FT_FI2

29) chain B
residue 125
type BINDING
sequence Q
description BINDING => ECO:0000255|HAMAP-Rule:MF_04029
source Swiss-Prot : SWS_FT_FI2

30) chain B
residue 216
type BINDING
sequence R
description BINDING => ECO:0000255|HAMAP-Rule:MF_04029
source Swiss-Prot : SWS_FT_FI2


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