eF-site ID 1kc8-Z
PDB Code 1kc8
Chain Z

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Title Co-crystal Structure of Blasticidin S Bound to the 50S Ribosomal Subunit
Classification RIBOSOME
Compound 23S RRNA
Source ORGANISM_SCIENTIFIC: Haloarcula marismortui;
Sequence Z:  TELQARGLTEKTPDLSDEDARLLTQRHRVGKPQFNRQDHH
KKKRVSTSWRKPRGQLSKQRRGIKGKGDTVEAGFRSPTAV
RGKHPSGFEEVRVHNVDDLEGVDGDTEAVRIASKVGARKR
ERIEEEAEDAGIRVLNPTYVEV
Description


Functional site

1) chain Z
residue 115
type
sequence R
description BINDING SITE FOR RESIDUE CL A 8517
source : VC5

2) chain Z
residue 133
type
sequence H
description BINDING SITE FOR RESIDUE MG Z 8109
source : ZC3

3) chain Z
residue 136
type
sequence K
description BINDING SITE FOR RESIDUE MG Z 8109
source : ZC3

4) chain Z
residue 137
type
sequence K
description BINDING SITE FOR RESIDUE MG Z 8109
source : ZC3

5) chain Z
residue 139
type
sequence V
description BINDING SITE FOR RESIDUE MG Z 8109
source : ZC3

6) chain Z
residue 169
type
sequence R
description BINDING SITE FOR RESIDUE CL Z 8520
source : ZC4

7) chain Z
residue 128-148
type prosite
sequence FNRQDHHKKKRVSTSWRKPRG
description RIBOSOMAL_L32E Ribosomal protein L32e signature. FnRqdhhKkkRVsts..WRKprG
source prosite : PS00580


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