eF-site ID 1kc8-U
PDB Code 1kc8
Chain U

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Title Co-crystal Structure of Blasticidin S Bound to the 50S Ribosomal Subunit
Classification RIBOSOME
Compound 23S RRNA
Source ORGANISM_SCIENTIFIC: Haloarcula marismortui;
Sequence U:  SKQPDKQRKSQRRAPLHERHKQVRATLSADLREEYGQRNV
RVNAGDTVEVLRGDFAGEEGEVINVDLDKAVIHVEDVTLE
KTDGEEVPRPLDTSNVRVTDLDLEDEKREARLESEDDSA
Description


Functional site

1) chain U
residue 37
type
sequence Q
description BINDING SITE FOR RESIDUE MG U 8073
source : YC9

2) chain U
residue 111
type
sequence R
description BINDING SITE FOR RESIDUE MG U 8073
source : YC9

3) chain U
residue 112
type
sequence L
description BINDING SITE FOR RESIDUE MG U 8073
source : YC9

4) chain U
residue 114
type
sequence S
description BINDING SITE FOR RESIDUE MG U 8073
source : YC9

5) chain U
residue 117
type
sequence D
description BINDING SITE FOR RESIDUE MG U 8073
source : YC9

6) chain U
residue 94
type
sequence S
description BINDING SITE FOR RESIDUE NA U 8343
source : ZC1

7) chain U
residue 95
type
sequence N
description BINDING SITE FOR RESIDUE NA U 8343
source : ZC1

8) chain U
residue 45-62
type prosite
sequence GDTVEVLRGDFAGEEGEV
description RIBOSOMAL_L24 Ribosomal protein L24 signature. GDtVeVLrGdfAGee.GeV
source prosite : PS01108


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