eF-site ID 1kc8-S
PDB Code 1kc8
Chain S

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Title Co-crystal Structure of Blasticidin S Bound to the 50S Ribosomal Subunit
Classification RIBOSOME
Compound 23S RRNA
Source ORGANISM_SCIENTIFIC: Haloarcula marismortui;
Sequence S:  GISYSVEADPDTTAKAMLRERQMSFKHSKAIAREIKGKTA
GEAVDYLEAVIEGDQPVPFKQHNSGVGHKSKVDGWDAGRY
PEKASKAFLDLLENAVGNADHQGFDGEAMTIKHVAAHKVG
EQQGRKPRAMGRASAWNSPQVDVELILEEP
Description


Functional site

1) chain S
residue 65
type
sequence G
description BINDING SITE FOR RESIDUE MG A 8044
source : FC1

2) chain S
residue 70
type
sequence S
description BINDING SITE FOR RESIDUE NA S 8337
source : YC4

3) chain S
residue 72
type
sequence V
description BINDING SITE FOR RESIDUE NA S 8337
source : YC4

4) chain S
residue 72
type
sequence V
description BINDING SITE FOR RESIDUE NA S 8338
source : YC5

5) chain S
residue 75
type
sequence W
description BINDING SITE FOR RESIDUE NA S 8338
source : YC5

6) chain S
residue 60
type
sequence K
description BINDING SITE FOR RESIDUE NA S 8386
source : YC6

7) chain S
residue 61
type
sequence Q
description BINDING SITE FOR RESIDUE NA S 8386
source : YC6

8) chain S
residue 63
type
sequence N
description BINDING SITE FOR RESIDUE NA S 8386
source : YC6

9) chain S
residue 118
type
sequence K
description BINDING SITE FOR RESIDUE CL S 8506
source : YC7

10) chain S
residue 123-147
type prosite
sequence QGRKPRAMGRASAWNSPQVDVELIL
description RIBOSOMAL_L22 Ribosomal protein L22 signature. QgrKpRAmGRasawnspqVDVELiL
source prosite : PS00464


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