eF-site ID 1kc8-R
PDB Code 1kc8
Chain R

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Title Co-crystal Structure of Blasticidin S Bound to the 50S Ribosomal Subunit
Classification RIBOSOME
Compound 23S RRNA
Source ORGANISM_SCIENTIFIC: Haloarcula marismortui;
Sequence R:  PSSNGPLEGTRGKLKNKPRDRGTSPPQRAVEEFDDGEKVH
LKIDPSVPNGRFHPRFDGQTGTVEGKQGDAYKVDIVDGGK
EKTIIVTAAHLRRQE
Description


Functional site

1) chain R
residue 52
type
sequence F
description BINDING SITE FOR RESIDUE CL A 8511
source : UC9

2) chain R
residue 53
type
sequence H
description BINDING SITE FOR RESIDUE CL A 8511
source : UC9

3) chain R
residue 56
type
sequence F
description BINDING SITE FOR RESIDUE CL A 8511
source : UC9

4) chain R
residue 20
type
sequence D
description BINDING SITE FOR RESIDUE NA R 8348
source : YC3

5) chain R
residue 22
type
sequence G
description BINDING SITE FOR RESIDUE NA R 8348
source : YC3

6) chain R
residue 24
type
sequence S
description BINDING SITE FOR RESIDUE NA R 8348
source : YC3

7) chain R
residue 46
type
sequence S
description BINDING SITE FOR RESIDUE NA R 8348
source : YC3

8) chain R
residue 36-61
type prosite
sequence GEKVHLKIDPSVPNGRFHPRFDGQTG
description RIBOSOMAL_L21E Ribosomal protein L21e signature. GEkVhlkidpsvpn.GrfHprFdGqTG
source prosite : PS01171


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