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eF-site ID
|
1kc8-P |
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PDB Code
|
1kc8 |
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Chain
|
P |
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click to enlarge
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Title
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Co-crystal Structure of Blasticidin S Bound to the 50S Ribosomal Subunit |
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Classification
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RIBOSOME |
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Compound
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23S RRNA |
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Source
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ORGANISM_SCIENTIFIC: Haloarcula marismortui; |
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Sequence
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P: |
SKTNPRLSSLIADLKSAARSSGGAVWGDVAERLEKPRRTH
AEVNLGRIERYAQEDETVVVPGKVLGSGVLQKDVTVAAVD
FSGTAETKIDQVGEAVSLEQAIENNPEGSHVRVIR
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Description
|
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Functional site
|
|
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1)
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chain |
P |
| residue |
40 |
| type |
|
| sequence |
H
|
| description |
BINDING SITE FOR RESIDUE CD P 8405
|
| source |
: YC1
|
|
|
2)
|
chain |
P |
| residue |
44 |
| type |
|
| sequence |
N
|
| description |
BINDING SITE FOR RESIDUE CL P 8508
|
| source |
: YC2
|
|
|
3)
|
chain |
P |
| residue |
31-48 |
| type |
prosite |
| sequence |
ERLEKPRRTHAEVNLGRI
|
| description |
RIBOSOMAL_L18E Ribosomal protein L18e signature. ErLekPRrtHAeVNLgRI
|
| source |
prosite : PS01106
|
|
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4)
|
chain |
P |
| residue |
63-93 |
| type |
prosite |
| sequence |
KVLGSGVLQKDVTVAAVDFSGTAETKIDQVG
|
| description |
RIBOSOMAL_L15 Ribosomal protein L15 signature. KVLGaGqVrhe..LtLiaddFSegArekVegaG
|
| source |
prosite : PS00475
|
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