eF-site ID 1kc8-N
PDB Code 1kc8
Chain N

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Title Co-crystal Structure of Blasticidin S Bound to the 50S Ribosomal Subunit
Classification RIBOSOME
Compound 23S RRNA
Source ORGANISM_SCIENTIFIC: Haloarcula marismortui;
Sequence N:  ARSAYSYIREAWKRPKEGQIAELMWHRMQEWRNEPAVVRI
ERPTRLDRARSLGYKAKQGIIVVRVAIRKGSSRRTRFNKG
RRSKRMMVNRITRKKNIQRIAEERANRKFPNLRVLNSYSV
GEDGRHKWHEVILIDPDHPAIKSDDQLSWISRTRHRLRTF
RGLTSAGRRCRGLRGQGKGSEKVRPSLRVNGAKA
Description


Functional site

1) chain N
residue 189
type
sequence V
description BINDING SITE FOR RESIDUE MG A 8112
source : LC8

2) chain N
residue 82
type
sequence R
description BINDING SITE FOR RESIDUE K A 8203
source : MC7

3) chain N
residue 193
type
sequence K
description BINDING SITE FOR RESIDUE NA A 8365
source : SC6

4) chain N
residue 194
type
sequence A
description BINDING SITE FOR RESIDUE NA A 8365
source : SC6

5) chain N
residue 106
type
sequence N
description BINDING SITE FOR RESIDUE NA N 8347
source : XC7

6) chain N
residue 109
type
sequence F
description BINDING SITE FOR RESIDUE NA N 8347
source : XC7

7) chain N
residue 110
type
sequence P
description BINDING SITE FOR RESIDUE NA N 8347
source : XC7

8) chain N
residue 112
type
sequence L
description BINDING SITE FOR RESIDUE NA N 8347
source : XC7

9) chain N
residue 106
type
sequence N
description BINDING SITE FOR RESIDUE CL N 8518
source : XC8

10) chain N
residue 114
type
sequence V
description BINDING SITE FOR RESIDUE CL N 8518
source : XC8

11) chain N
residue 157
type
sequence L
description BINDING SITE FOR RESIDUE CL N 8518
source : XC8

12) chain N
residue 158
type
sequence R
description BINDING SITE FOR RESIDUE CL N 8518
source : XC8

13) chain N
residue 159
type
sequence T
description BINDING SITE FOR RESIDUE CL N 8518
source : XC8

14) chain N
residue 47-70
type prosite
sequence DRARSLGYKAKQGIIVVRVAIRKG
description RIBOSOMAL_L15E Ribosomal protein L15e signature. DRARsLGYkAkqGIIVVRvAIrKG
source prosite : PS01194


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