eF-site ID 1kc8-K
PDB Code 1kc8
Chain K

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Title Co-crystal Structure of Blasticidin S Bound to the 50S Ribosomal Subunit
Classification RIBOSOME
Compound 23S RRNA
Source ORGANISM_SCIENTIFIC: Haloarcula marismortui;
Sequence K:  AEFDADVIVDARDCIMGRVASQVAEQALDGETVAVVNAER
AVITGREEQIVEKYEKRVDIGNDNGYFYPKRPDGIFKRTI
RGMLPHKKQRGREAFESVRVYLGNPYDEDGEVLDGTSLDR
LSNIKFVTLGEISETLGANKTW
Description


Functional site

1) chain K
residue 47
type
sequence T
description BINDING SITE FOR RESIDUE NA A 8355
source : RC5

2) chain K
residue 60
type
sequence R
description BINDING SITE FOR RESIDUE NA K 8346
source : WC8

3) chain K
residue 61
type
sequence V
description BINDING SITE FOR RESIDUE NA K 8346
source : WC8

4) chain K
residue 63
type
sequence I
description BINDING SITE FOR RESIDUE NA K 8346
source : WC8

5) chain K
residue 69
type
sequence Y
description BINDING SITE FOR RESIDUE NA K 8346
source : WC8

6) chain K
residue 127
type
sequence I
description BINDING SITE FOR RESIDUE CL K 8501
source : WC9

7) chain K
residue 128
type
sequence K
description BINDING SITE FOR RESIDUE CL K 8501
source : WC9

8) chain K
residue 88
type
sequence P
description BINDING SITE FOR RESIDUE CL K 8502
source : XC1

9) chain K
residue 90
type
sequence K
description BINDING SITE FOR RESIDUE CL K 8502
source : XC1

10) chain K
residue 52
type
sequence Q
description BINDING SITE FOR RESIDUE CL K 8516
source : XC2

11) chain K
residue 56
type
sequence K
description BINDING SITE FOR RESIDUE CL K 8516
source : XC2

12) chain K
residue 64
type
sequence G
description BINDING SITE FOR RESIDUE CL K 8521
source : XC3

13) chain K
residue 65
type
sequence N
description BINDING SITE FOR RESIDUE CL K 8521
source : XC3

14) chain K
residue 69
type
sequence Y
description BINDING SITE FOR RESIDUE CL K 8521
source : XC3

15) chain K
residue 83-106
type prosite
sequence IRGMLPHKKQRGREAFESVRVYLG
description RIBOSOMAL_L13 Ribosomal protein L13 signature. IRGMLPhkkqrGReafesVrVYlG
source prosite : PS00783


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