eF-site ID 1kc8-D PDB Code 1kc8 Chain D click to enlarge Title Co-crystal Structure of Blasticidin S Bound to the 50S Ribosomal Subunit Classification RIBOSOME Compound 23S RRNA Source ORGANISM_SCIENTIFIC: Haloarcula marismortui; Sequence D:  PQPSRPRKGSLGFGPRKRSTSETPRFNSWPSDDGQPGVQG FAGYKAGMTHVVLVNDEPNSPREGMEETVPVTVIETPPMR AVALRAYEDTPYGQRPLTEVWTDEFHSELDRTLDVPEDHD PDAAEEQIRDAHEAGDLGDLRLITHTVPDAVPSVPKKKPD VMETRVGGGSVSDRLDHALDIVEDGGEHAMNDIFRAGEYA DVAGVTKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNLG PWNPSRVRSTVPQQGQTGYHQRTELNKRLIDIGEGDEPTV DGGFVNYGEVDGPYTLVKGSVPGPDKRLVRFRPAVRPNDQ PRLDPEVRYVSNESNQG Description Functional site 1) chain D residue 230 type sequence Q description BINDING SITE FOR RESIDUE MG A 8010 source : BC3 2) chain D residue 335 type sequence N description BINDING SITE FOR RESIDUE MG A 8056 source : GC4 3) chain D residue 242 type sequence W description BINDING SITE FOR RESIDUE NA A 8314 source : NC9 4) chain D residue 229 type sequence R description BINDING SITE FOR RESIDUE NA A 8321 source : OC7 5) chain D residue 242 type sequence W description BINDING SITE FOR RESIDUE NA A 8358 source : RC8 6) chain D residue 230 type sequence Q description BINDING SITE FOR RESIDUE NA A 8361 source : SC2 7) chain D residue 223 type sequence R description BINDING SITE FOR RESIDUE CL D 8519 source : WC4 8) chain D residue 224 type sequence K description BINDING SITE FOR RESIDUE CL D 8519 source : WC4 9) chain D residue 194-217 type prosite sequence FRAGEYADVAGVTKGKGTQGPVKR description RIBOSOMAL_L3 Ribosomal protein L3 signature. FrageyaDvaGvTkGKGtqGpvkR source prosite : PS00474

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