eF-site ID 1kc8-1
PDB Code 1kc8
Chain 1

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Title Co-crystal Structure of Blasticidin S Bound to the 50S Ribosomal Subunit
Classification RIBOSOME
Compound 23S RRNA
Source ORGANISM_SCIENTIFIC: Haloarcula marismortui;
Sequence 1:  RTGRFGPRYGLKIRVRVADVEIKHKKKHKCPVCGFKKLKR
AGTGIWMCGHCGYKIAGGCYQPETVAGKAVMKA
Description


Functional site

1) chain 1
residue 13
type
sequence R
description BINDING SITE FOR RESIDUE MG 1 8105
source : ZC5

2) chain 1
residue 14
type
sequence F
description BINDING SITE FOR RESIDUE MG 1 8105
source : ZC5

3) chain 1
residue 42
type
sequence C
description BINDING SITE FOR RESIDUE CD 1 8403
source : ZC6

4) chain 1
residue 60
type
sequence C
description BINDING SITE FOR RESIDUE CD 1 8403
source : ZC6

5) chain 1
residue 39
type BINDING
sequence C
description BINDING => ECO:0000255|HAMAP-Rule:MF_00327
source Swiss-Prot : SWS_FT_FI2

6) chain 1
residue 42
type BINDING
sequence C
description BINDING => ECO:0000255|HAMAP-Rule:MF_00327
source Swiss-Prot : SWS_FT_FI2

7) chain 1
residue 57
type BINDING
sequence C
description BINDING => ECO:0000255|HAMAP-Rule:MF_00327
source Swiss-Prot : SWS_FT_FI2

8) chain 1
residue 60
type BINDING
sequence C
description BINDING => ECO:0000255|HAMAP-Rule:MF_00327
source Swiss-Prot : SWS_FT_FI2

9) chain 1
residue 39-60
type ZN_FING
sequence CPVCGFKKLKRAGTGIWMCGHC
description C4-type => ECO:0000255|HAMAP-Rule:MF_00327
source Swiss-Prot : SWS_FT_FI1


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