eF-site ID 1k9x-ABCD
PDB Code 1k9x
Chain A, B, C, D

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Title Structure of Pyrococcus furiosus carboxypeptidase Apo-Yb
Classification carboxypeptidase
Compound M32 carboxypeptidase
Source ORGANISM_SCIENTIFIC: Pyrococcus furiosus;
Sequence A:  EVFQNETIKQILAKYRRIWAIGHAQSVLGWDLEVNMPKEG
ILERSVAQGELSVLSHELLLHPEFVNLVEKAKGLENLNEY
ERGIVRVLDRSIRIARAFPPEFIREVSETTSLATKAWEEA
KAKDDFSKFEPWLDKIISLAKRAAEYLGYEEEPYDALLDL
YEEGLRTRDVEKMFEVLEKKLKPLLDKILEEGKVPREHPL
EKEKYEREWMERVNLWILQKFGFPLGTRARLDVSAHPFTT
EFGIRDVRITTRYEGYDFRRTILSTVHEFGHALYELQQDE
RFMFTPIAGGVSLGIHESQSRFWENIIGRSKEFVELIYPV
LKENLPFMSNYTPEDVYLYFNIVRPDFIRTEADVVTYNFH
ILLRFKLERLMVSEEIKAKDLPEMWNDEMERLLGIRPRKY
SEGILQDIHWAHGSIGYFPTYTIGTLLSAQLYYHIKKDIP
DFEEKVAKAEFDPIKAWLREKIHRWGSIYPPKELLKKAIG
EDMDAEYFVRWVKEKYL
B:  EVFQNETIKQILAKYRRIWAIGHAQSVLGWDLEVNMPKEG
ILERSVAQGELSVLSHELLLHPEFVNLVEKAKGLENLNEY
ERGIVRVLDRSIRIARAFPPEFIREVSETTSLATKAWEEA
KAKDDFSKFEPWLDKIISLAKRAAEYLGYEEEPYDALLDL
YEEGLRTRDVEKMFEVLEKKLKPLLDKILEEGKVPREHPL
EKEKYEREWMERVNLWILQKFGFPLGTRARLDVSAHPFTT
EFGIRDVRITTRYEGYDFRRTILSTVHEFGHALYELQQDE
RFMFTPIAGGVSLGIHESQSRFWENIIGRSKEFVELIYPV
LKENLPFMSNYTPEDVYLYFNIVRPDFIRTEADVVTYNFH
ILLRFKLERLMVSEEIKAKDLPEMWNDEMERLLGIRPRKY
SEGILQDIHWAHGSIGYFPTYTIGTLLSAQLYYHIKKDIP
DFEEKVAKAEFDPIKAWLREKIHRWGSIYPPKELLKKAIG
EDMDAEYFVRWVKEKYL
C:  EVFQNETIKQILAKYRRIWAIGHAQSVLGWDLEVNMPKEG
ILERSVAQGELSVLSHELLLHPEFVNLVEKAKGLENLNEY
ERGIVRVLDRSIRIARAFPPEFIREVSETTSLATKAWEEA
KAKDDFSKFEPWLDKIISLAKRAAEYLGYEEEPYDALLDL
YEEGLRTRDVEKMFEVLEKKLKPLLDKILEEGKVPREHPL
EKEKYEREWMERVNLWILQKFGFPLGTRARLDVSAHPFTT
EFGIRDVRITTRYEGYDFRRTILSTVHEFGHALYELQQDE
RFMFTPIAGGVSLGIHESQSRFWENIIGRSKEFVELIYPV
LKENLPFMSNYTPEDVYLYFNIVRPDFIRTEADVVTYNFH
ILLRFKLERLMVSEEIKAKDLPEMWNDEMERLLGIRPRKY
SEGILQDIHWAHGSIGYFPTYTIGTLLSAQLYYHIKKDIP
DFEEKVAKAEFDPIKAWLREKIHRWGSIYPPKELLKKAIG
EDMDAEYFVRWVKEKYL
D:  EVFQNETIKQILAKYRRIWAIGHAQSVLGWDLEVNMPKEG
ILERSVAQGELSVLSHELLLHPEFVNLVEKAKGLENLNEY
ERGIVRVLDRSIRIARAFPPEFIREVSETTSLATKAWEEA
KAKDDFSKFEPWLDKIISLAKRAAEYLGYEEEPYDALLDL
YEEGLRTRDVEKMFEVLEKKLKPLLDKILEEGKVPREHPL
EKEKYEREWMERVNLWILQKFGFPLGTRARLDVSAHPFTT
EFGIRDVRITTRYEGYDFRRTILSTVHEFGHALYELQQDE
RFMFTPIAGGVSLGIHESQSRFWENIIGRSKEFVELIYPV
LKENLPFMSNYTPEDVYLYFNIVRPDFIRTEADVVTYNFH
ILLRFKLERLMVSEEIKAKDLPEMWNDEMERLLGIRPRKY
SEGILQDIHWAHGSIGYFPTYTIGTLLSAQLYYHIKKDIP
DFEEKVAKAEFDPIKAWLREKIHRWGSIYPPKELLKKAIG
EDMDAEYFVRWVKEKYL
Description


Functional site

1) chain A
residue 266-275
type prosite
sequence STVHEFGHAL
description ZINC_PROTEASE Neutral zinc metallopeptidases, zinc-binding region signature. STVHEFGHAL
source prosite : PS00142

2) chain B
residue 270
type ACT_SITE
sequence E
description Proton donor/acceptor => ECO:0000255|PROSITE-ProRule:PRU01378
source Swiss-Prot : SWS_FT_FI1

3) chain C
residue 270
type ACT_SITE
sequence E
description Proton donor/acceptor => ECO:0000255|PROSITE-ProRule:PRU01378
source Swiss-Prot : SWS_FT_FI1

4) chain D
residue 270
type ACT_SITE
sequence E
description Proton donor/acceptor => ECO:0000255|PROSITE-ProRule:PRU01378
source Swiss-Prot : SWS_FT_FI1

5) chain A
residue 270
type ACT_SITE
sequence E
description Proton donor/acceptor => ECO:0000255|PROSITE-ProRule:PRU01378
source Swiss-Prot : SWS_FT_FI1

6) chain A
residue 299
type BINDING
sequence E
description BINDING => ECO:0000269|PubMed:11839307
source Swiss-Prot : SWS_FT_FI2

7) chain B
residue 269
type BINDING
sequence H
description BINDING => ECO:0000269|PubMed:11839307
source Swiss-Prot : SWS_FT_FI2

8) chain B
residue 273
type BINDING
sequence H
description BINDING => ECO:0000269|PubMed:11839307
source Swiss-Prot : SWS_FT_FI2

9) chain B
residue 299
type BINDING
sequence E
description BINDING => ECO:0000269|PubMed:11839307
source Swiss-Prot : SWS_FT_FI2

10) chain C
residue 269
type BINDING
sequence H
description BINDING => ECO:0000269|PubMed:11839307
source Swiss-Prot : SWS_FT_FI2

11) chain C
residue 273
type BINDING
sequence H
description BINDING => ECO:0000269|PubMed:11839307
source Swiss-Prot : SWS_FT_FI2

12) chain D
residue 269
type BINDING
sequence H
description BINDING => ECO:0000269|PubMed:11839307
source Swiss-Prot : SWS_FT_FI2

13) chain D
residue 273
type BINDING
sequence H
description BINDING => ECO:0000269|PubMed:11839307
source Swiss-Prot : SWS_FT_FI2

14) chain D
residue 299
type BINDING
sequence E
description BINDING => ECO:0000269|PubMed:11839307
source Swiss-Prot : SWS_FT_FI2

15) chain C
residue 299
type BINDING
sequence E
description BINDING => ECO:0000269|PubMed:11839307
source Swiss-Prot : SWS_FT_FI2

16) chain A
residue 269
type BINDING
sequence H
description BINDING => ECO:0000269|PubMed:11839307
source Swiss-Prot : SWS_FT_FI2

17) chain A
residue 273
type BINDING
sequence H
description BINDING => ECO:0000269|PubMed:11839307
source Swiss-Prot : SWS_FT_FI2


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