eF-site ID 1k83-I
PDB Code 1k83
Chain I

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Title Crystal Structure of Yeast RNA Polymerase II Complexed with the Inhibitor Alpha Amanitin
Classification TRANSCRIPTION/TOXIN
Compound DNA-DIRECTED RNA POLYMERASE II LARGEST SUBUNIT
Source ORGANISM_COMMON: BAKER'S YEAST; ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE;
Sequence I:  MTTFRFCRDCNNMLYPREDKENNRLLFECRTCSYVEEAGS
PLVYRHELITNIGETAGVVQDIGSDPTLPRSDRECPKCHS
RENVFFQSQQRRKDTSMVLFFVCLSCSHIFTSDQKNKRTQ
FS
Description


Functional site

1) chain I
residue 7
type
sequence C
description BINDING SITE FOR RESIDUE ZN I3003
source : AC3

2) chain I
residue 10
type
sequence C
description BINDING SITE FOR RESIDUE ZN I3003
source : AC3

3) chain I
residue 29
type
sequence C
description BINDING SITE FOR RESIDUE ZN I3003
source : AC3

4) chain I
residue 32
type
sequence C
description BINDING SITE FOR RESIDUE ZN I3003
source : AC3

5) chain I
residue 75
type
sequence C
description BINDING SITE FOR RESIDUE ZN I3004
source : AC4

6) chain I
residue 78
type
sequence C
description BINDING SITE FOR RESIDUE ZN I3004
source : AC4

7) chain I
residue 103
type
sequence C
description BINDING SITE FOR RESIDUE ZN I3004
source : AC4

8) chain I
residue 106
type
sequence C
description BINDING SITE FOR RESIDUE ZN I3004
source : AC4

9) chain I
residue 29
type CROSSLNK
sequence C
description Cyclopeptide (Ile-Pro) => ECO:0000269|PubMed:18552824, ECO:0000269|PubMed:363352, ECO:0000269|PubMed:4865716
source Swiss-Prot : SWS_FT_FI3

10) chain I
residue 32
type CROSSLNK
sequence C
description Cyclopeptide (Ile-Pro) => ECO:0000269|PubMed:18552824, ECO:0000269|PubMed:363352, ECO:0000269|PubMed:4865716
source Swiss-Prot : SWS_FT_FI3

11) chain I
residue 103
type CROSSLNK
sequence C
description 2'-cysteinyl-6'-hydroxytryptophan sulfoxide (Trp-Cys) => ECO:0000305
source Swiss-Prot : SWS_FT_FI4

12) chain I
residue 106
type CROSSLNK
sequence C
description 2'-cysteinyl-6'-hydroxytryptophan sulfoxide (Trp-Cys) => ECO:0000305
source Swiss-Prot : SWS_FT_FI4

13) chain I
residue 40
type MOD_RES
sequence S
description Phosphoserine => ECO:0007744|PubMed:18407956
source Swiss-Prot : SWS_FT_FI5

14) chain I
residue 75-110
type prosite
sequence CPKCHSRENVFFQSQQRRKDTSMVLFFVCLSCSHIF
description ZF_TFIIS_1 Zinc finger TFIIS-type signature. CpkChsrenvffqSQQRRkDTSmvlffvCls...CshiF
source prosite : PS00466

15) chain I
residue 6-32
type prosite
sequence FCRDCNNMLYPREDKENNRLLFECRTC
description RNA_POL_M_15KD RNA polymerases M / 15 Kd subunits signature. FCrDCNNMLypredkennrllfeCrtC
source prosite : PS01030


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