eF-site ID 1k5m-ABCD PDB Code 1k5m Chain A, B, C, D click to enlarge Title Crystal Structure of a Human Rhinovirus Type 14:Human Immunodeficiency Virus Type 1 V3 Loop Chimeric Virus MN-III-2 Classification VIRUS Compound COAT PROTEIN VP1 (P1D) Source Human rhinovirus 14 (HRV-14) (POLG_HRV14) Sequence A:  EEVIVEKTKQTVASISSGPKHTQKVPILTANETGATMPVL PSDSIETRTTYMHFNGSETDVECFLGRAACVHVTEIQNKD ATGIDNHREAKLFNDWKINLSSLVQLRKKLELFTYVRFDS EYTILATASQPDSANYSSNLVVQAMYVPPGAPNPKEWDDY TWQSASNPSVFFKVGDTSRFSVPYVGLASAYNCFYDGYSH DDAETQYGITVLNHMGSMAFRIVNEHDEHKTLVKIRVYHR AKHVEAWIPRAPRALPYTSIGRTNYPKNTEPVIKKRKGDI KSY B:  GYSDRVQQITLGNSTITTQEAANAVVCYAEWPEYLPDVDA SDVNKTSKPDTSVCRFYTLDSKTWTTGSKGWCWKLPDALK DMGVFGQNMFFHSLGRSGYTVHVQCNATKFHSGCLLVVVI PEHQLASHEGGNVSVKYTFTHPGERGIDLSSAADTIGPGR AFYTTKNNEVGGPVKDVIYNMNGTLLGNLLIFPHQFINLR TNNTATIVIPYINSVPIDSMTRHNNVSLMVIPIAPLTVPT GATPSLPITVTIAPMCTEFSGIRSKSIVPQ C:  GLPTTTLPGSGQFLTTDDRQSPSALPNYEPTPRIHIPGKV HNLLEIIQVDTLIPMNNTHTKDEVNSYLIPLNANRQNEQV FGTNLFIGDGVFKTTLLGEIVQYYTHWSGSLRFSLMYTGP ALSSAKLILAYTPPGARGPQDRREAMLGTHVVWDIGLQST IVMTIPWTSGVQFRYTDPDTYTSAGFLSCWYQTSLILPPE TTGQVYLLSFISACPDFKLRLMKDTQTISQTVALTE D:  INYYKDAASTSSAGQSLSMDPSKFTEPVKDLMLKGAPALN Description Functional site 1) chain A residue 1107 type sequence S description BINDING SITE FOR RESIDUE SPH A 1971 source : AC1 2) chain A residue 1122 type sequence V description BINDING SITE FOR RESIDUE SPH A 1971 source : AC1 3) chain A residue 1128 type sequence Y description BINDING SITE FOR RESIDUE SPH A 1971 source : AC1 4) chain A residue 1152 type sequence Y description BINDING SITE FOR RESIDUE SPH A 1971 source : AC1 5) chain A residue 1186 type sequence F description BINDING SITE FOR RESIDUE SPH A 1971 source : AC1 6) chain A residue 1188 type sequence V description BINDING SITE FOR RESIDUE SPH A 1971 source : AC1 7) chain A residue 1197 type sequence Y description BINDING SITE FOR RESIDUE SPH A 1971 source : AC1 8) chain A residue 1199 type sequence C description BINDING SITE FOR RESIDUE SPH A 1971 source : AC1 9) chain D residue 1968 type SITE sequence N description Cleavage; by autolysis => ECO:0000305|PubMed:8383233 source Swiss-Prot : SWS_FT_FI1

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