eF-site ID 1jxl-APT PDB Code 1jxl Chain A, P, T click to enlarge Title Crystal Structure of a Y-Family DNA Polymerase in a Ternary Complex with DNA Substrates and an Incoming Nucleotide Classification TRANSFERASE/DNA Compound 5'-D(*GP*GP*GP*GP*GP*AP*AP*GP*GP*AP*TP*T)-3' Source (1JXL) Sequence A:  MIVLFVDFDYFYAQVEEVLNPSLKGKPVVVCVFSGRFEDS GAVATANYEARKFGVKAGIPIVEAKKILPNAVYLPMRKEV YQQVSSRIMNLLREYSEKIEIASIDEAYLDISDKVRDYRE AYNLGLEIKNKILEKEKITVTVGISKNKVFAKIAADMAKP NGIKVIDDEEVKRLIRELDIADVPGIGNITAEKLKKLGIN KLVDTLSIEFDKLKGMIGEAKAKYLISLARDEYNEPIRTR VRKSIGRIVTMKRNSRNLEEIKPYLFRAIEESYYKLDKRI PKAIHVVAVTEDLDIVSRGRTFPHGISKETAYSESVKLLQ KILEEDERKIRRIGVRFSKFI P:  GGGGGAAGGATT T:  TCGAAXCCTXCCCCC Description Functional site 1) chain A residue 7 type sequence D description BINDING SITE FOR RESIDUE CA A 1402 source : AC1 2) chain A residue 8 type sequence F description BINDING SITE FOR RESIDUE CA A 1402 source : AC1 3) chain A residue 105 type sequence D description BINDING SITE FOR RESIDUE CA A 1402 source : AC1 4) chain A residue 7 type sequence D description BINDING SITE FOR RESIDUE MG A 1403 source : AC2 5) chain A residue 105 type sequence D description BINDING SITE FOR RESIDUE MG A 1403 source : AC2 6) chain A residue 106 type sequence E description BINDING SITE FOR RESIDUE MG A 1403 source : AC2 7) chain A residue 10 type sequence Y description BINDING SITE FOR RESIDUE MG A 1404 source : AC3 8) chain A residue 51 type sequence R description BINDING SITE FOR RESIDUE MG A 1404 source : AC3 9) chain A residue 181 type sequence A description BINDING SITE FOR RESIDUE MG A 1405 source : AC4 10) chain A residue 186 type sequence I description BINDING SITE FOR RESIDUE MG A 1405 source : AC4 11) chain P residue 12 type sequence T description BINDING SITE FOR RESIDUE EDO T 1204 source : AC5 12) chain T residue 4 type sequence G description BINDING SITE FOR RESIDUE EDO T 1204 source : AC5 13) chain T residue 5 type sequence A description BINDING SITE FOR RESIDUE EDO T 1204 source : AC5 14) chain A residue 7 type sequence D description BINDING SITE FOR RESIDUE DG3 A 401 source : AC6 15) chain A residue 8 type sequence F description BINDING SITE FOR RESIDUE DG3 A 401 source : AC6 16) chain A residue 10 type sequence Y description BINDING SITE FOR RESIDUE DG3 A 401 source : AC6 17) chain A residue 11 type sequence F description BINDING SITE FOR RESIDUE DG3 A 401 source : AC6 18) chain A residue 44 type sequence A description BINDING SITE FOR RESIDUE DG3 A 401 source : AC6 19) chain A residue 45 type sequence T description BINDING SITE FOR RESIDUE DG3 A 401 source : AC6 20) chain A residue 51 type sequence R description BINDING SITE FOR RESIDUE DG3 A 401 source : AC6 21) chain A residue 57 type sequence A description BINDING SITE FOR RESIDUE DG3 A 401 source : AC6 22) chain A residue 58 type sequence G description BINDING SITE FOR RESIDUE DG3 A 401 source : AC6 23) chain A residue 105 type sequence D description BINDING SITE FOR RESIDUE DG3 A 401 source : AC6 24) chain A residue 106 type sequence E description BINDING SITE FOR RESIDUE DG3 A 401 source : AC6 25) chain A residue 159 type sequence K description BINDING SITE FOR RESIDUE DG3 A 401 source : AC6 26) chain P residue 12 type sequence T description BINDING SITE FOR RESIDUE DG3 A 401 source : AC6 27) chain T residue 3 type sequence C description BINDING SITE FOR RESIDUE DG3 A 401 source : AC6 28) chain T residue 4 type sequence G description BINDING SITE FOR RESIDUE DG3 A 401 source : AC6 29) chain A residue 7 type BINDING sequence D description source Swiss-Prot : SWS_FT_FI2 30) chain A residue 105 type BINDING sequence D description source Swiss-Prot : SWS_FT_FI2 31) chain A residue 106 type ACT_SITE sequence E description source Swiss-Prot : SWS_FT_FI1 32) chain A residue 12 type SITE sequence Y description Substrate discrimination source Swiss-Prot : SWS_FT_FI3

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