eF-site ID 1jey-A
PDB Code 1jey
Chain A

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Title Crystal Structure of the Ku heterodimer bound to DNA
Classification DNA BINDING PROTEIN/DNA
Compound DNA (5'-D(*GP*TP*TP*TP*TP*TP*AP*GP*TP*TP*TP*AP*TP*TP*GP*GP*GP*CP*GP*CP*G)-3')
Source null (1JEY)
Sequence A:  GRDSLIFLVDASKAMFESQSEDELTPFDMSIQCIQSVYIS
KIISSDRDLLAVVFYGTEKDKNSVNFKNIYVLQELDNPGA
KRILELDQFKGQQGQKRFQDMMGHGSDYSLSEVLWVCANL
FSDVQFKMSHKRIMLFTNEDNPHGNDSAKASRARTKAGDL
RDTGIFLDLMHLKKPGGFDISLFYRDIISVHFEESSKLED
LLRKVRAKETRKRALSRLKLKLNKDIVISVGIYNLVQKAL
KPPPIKLYRETNEPVKTKTRTFNTSTGGLLLPSDTKRSQI
YGSRQIILEKEETEELKRFDDPGLMLMGFKPLVLLKKHHY
LRPSLFVYPEESLVIGSSTLFSALLIKCLEKEVAALCRYT
PRRNIPPYFVALVPQEEELDDQKIQVTPPGFQLVFLPFAD
DKRKMPFTEKIMATPEQVGKMKAIVEKLRFTYRSDSFENP
VLQQHFRNLEALALDLMEPEQAVDLTLPKVEAMNKRLGSL
VDEFKELVYPPDY
Description


Functional site
1) chain A
residue 478
type MOD_RES
sequence F
description Phosphoserine => ECO:0007744|PubMed:18669648, ECO:0007744|PubMed:23186163
source Swiss-Prot : SWS_FT_FI7
2) chain A
residue 521
type MOD_RES
sequence L
description Phosphoserine => ECO:0007744|PubMed:19690332, ECO:0007744|PubMed:23186163
source Swiss-Prot : SWS_FT_FI8
3) chain A
residue 288
type CROSSLNK
sequence L
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2) => ECO:0007744|PubMed:28112733
source Swiss-Prot : SWS_FT_FI10
4) chain A
residue 318
type CROSSLNK
sequence R
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2) => ECO:0007744|PubMed:28112733
source Swiss-Prot : SWS_FT_FI10
5) chain A
residue 332
type CROSSLNK
sequence E
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2) => ECO:0007744|PubMed:28112733
source Swiss-Prot : SWS_FT_FI4
6) chain A
residue 52
type MOD_RES
sequence Q
description Phosphoserine; by PRKDC => ECO:0000269|PubMed:9362500
source Swiss-Prot : SWS_FT_FI5
7) chain A
residue 456
type MOD_RES
sequence P
description Phosphothreonine => ECO:0007744|PubMed:20068231, ECO:0007744|PubMed:21406692, ECO:0007744|PubMed:23186163
source Swiss-Prot : SWS_FT_FI6

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