|
eF-site ID
|
1jb7-AB |
PDB Code
|
1jb7 |
Chain
|
A, B |
|
click to enlarge
|
|
Title
|
DNA G-Quartets in a 1.86 A Resolution Structure of an Oxytricha nova Telomeric Protein-DNA Complex |
Classification
|
DNA-BINDING PROTEIN/DNA |
Compound
|
5'-D(*GP*GP*GP*GP*TP*TP*TP*TP*GP*GP*GP*G)-3' |
Source
|
null (1JB7) |
|
Sequence
|
A: |
YEYVELAKASLTSAQPQHFYAVVIDATFPYKTNQERYICS
LKIVDPTLYLKQQKGAGDASDYATLVLYAKRFEDLPIIHR
AGDIIRVHRATLRLYNGQRQFNANVFYSSSWALFSTDKRS
VTQEINNQDAVSDTTPFSFSSKHATIEKNEISILQNLRKW
ANQYFSSYSVISSDMYTALNKAQAQKGDFDVVAKILQVHE
LDEYTNELKLKDASGQVFYTLSLKLKFPHVRTGEVVRIRS
ATYDETSTQKKVLILSHYSNIITFIQSSKLAKELRAKIQD
DHSVEVASLKKNVSLNAVVLTEVDKKHAALPSTSLQDLFH
HADSDKELQAQDTFRTQFYVTKIEPSDVKEWVKGYDRKTK
KSSSLKGASGKGDNIFQVQFLVKDASTQLNNNTYRVLLYT
QDGLGANFFNVKADNLHKNADARKKLEDSAELLTKFNSYV
DAVVERRNGFYLIKDTKLIY
|
B: |
QQQSAFKQLYTELFNNEGDFSKVSSNLKKPLKCYVKESYP
HFLVTDGYFFVAPYFTKEAVNEFHAKFPNVNIVDLTDKVI
VINNWSLELRRVNSAEVFTSYANLEARLIVHSFKPNLQER
LNPTRYPVNLFRDDEFKTTIQHFRHTALQAAINKTVKGDN
LVDISKVADAAGKKGKVDAGIVKASASKGDEFSDFSFKEG
NTATLKIADIFVQEKG
|
|
Description
|
|
Functional site
|
|
1)
|
chain |
A |
residue |
481 |
type |
|
sequence |
R
|
description |
BINDING SITE FOR RESIDUE CL B 1005
|
source |
: AC5
|
|
2)
|
chain |
A |
residue |
483 |
type |
|
sequence |
N
|
description |
BINDING SITE FOR RESIDUE CL B 1005
|
source |
: AC5
|
|
3)
|
chain |
A |
residue |
484 |
type |
|
sequence |
G
|
description |
BINDING SITE FOR RESIDUE CL B 1005
|
source |
: AC5
|
|
4)
|
chain |
B |
residue |
182 |
type |
|
sequence |
K
|
description |
BINDING SITE FOR RESIDUE CL B 1005
|
source |
: AC5
|
|
5)
|
chain |
B |
residue |
183 |
type |
|
sequence |
G
|
description |
BINDING SITE FOR RESIDUE CL B 1005
|
source |
: AC5
|
|
|
|