eF-site ID 1irx-B PDB Code 1irx Chain B click to enlarge Title Crystal structure of class I lysyl-tRNA synthetase Classification LIGASE Compound lysyl-tRNA synthetase Source Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) (SYK_PYRHO) Sequence B:  HWADYIADKIIRERGEKEKYVVESGITPSGYVHVGNFREL FTAYIVGHALRDKGYEVRHIHMWDDYDRFRKVPRNVPQEW KDYLGMPISEVPDPWGCHESYAEHFMRKFEEEVEKLGIEV DLLYASELYKRGEYSEEIRLAFEKRDKIMEILNKYREIAK QPPLPENWWPAMVYCPEHRREAEIIEWDGGWKVKYKCPEG HEGWVDIRSGNVKLRWRVDWPMRWSHFGVDFEPAGKDHLV AGSSYDTGKEIIKEVYGKEAPLSLMYEFVGIKGQNVILLS DLYEVLEPGLVRFIYARHRPNKEIKIDLGLGILNLYDEFE KVERIYFGVEGDEELRRTYELSMPKKPERLVAQAPFRFLA VLVQLPHLTEEDIINVLIKQGHIPRDLSKEDVERVKLRIN LARNWVKKYAPEDVKFSILEKPPEVEVSEDVREAMNEVAE WLENHEEFSVEEFNNILFEVAKRRGISSREWFSTLYRLFI GKERGPRLASFLASLDRSFVIKRLRLEG Description Functional site 1) chain B residue 95 type sequence D description BINDING SITE FOR RESIDUE ZN B 600 source : AC3 2) chain B residue 99 type sequence C description BINDING SITE FOR RESIDUE ZN B 600 source : AC3 3) chain B residue 100 type sequence H description BINDING SITE FOR RESIDUE ZN B 600 source : AC3 4) chain B residue 106 type sequence H description BINDING SITE FOR RESIDUE ZN B 600 source : AC3 5) chain B residue 177 type sequence C description BINDING SITE FOR RESIDUE ZN B 602 source : AC4 6) chain B residue 197 type sequence Y description BINDING SITE FOR RESIDUE ZN B 602 source : AC4 7) chain B residue 199 type sequence C description BINDING SITE FOR RESIDUE ZN B 602 source : AC4 8) chain B residue 99 type BINDING sequence C description source Swiss-Prot : SWS_FT_FI1 9) chain B residue 100 type BINDING sequence H description source Swiss-Prot : SWS_FT_FI1 10) chain B residue 106 type BINDING sequence H description source Swiss-Prot : SWS_FT_FI1 11) chain B residue 177 type BINDING sequence C description source Swiss-Prot : SWS_FT_FI1 12) chain B residue 180 type BINDING sequence H description source Swiss-Prot : SWS_FT_FI1 13) chain B residue 199 type BINDING sequence C description source Swiss-Prot : SWS_FT_FI1 14) chain B residue 203 type BINDING sequence H description source Swiss-Prot : SWS_FT_FI1 15) chain B residue 95 type BINDING sequence D description source Swiss-Prot : SWS_FT_FI1

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