|
|
eF-site ID
|
1ihm-ABC |
|
PDB Code
|
1ihm |
|
Chain
|
A, B, C |
|
click to enlarge
|
|
|
Title
|
CRYSTAL STRUCTURE ANALYSIS OF NORWALK VIRUS CAPSID |
|
Classification
|
VIRUS |
|
Compound
|
capsid protein |
|
Source
|
null (Q83884_9CALI) |
|
|
Sequence
|
A: |
DPLAMDPVAGSSTAVATAGQVNPIDPWIINNFVQAPQGEF
TISPNNTPGDVLFDLSLGPHLNPFLLHLSQMYNGWVGNMR
VRIMLAGNAFTAGKIIVSCIPPGFGSHNLTIAQATLFPHV
IADVRTLDPIEVPLEDVRNVLFHNNDRNQQTMRLVCMLYT
PLRTGGGTGDSFVVAGRVMTCPSPDFNFLFLVPPTVEQKT
RPFTLPNLPLSSLSNSRAPLPISSMGISPDNVQSVQFQNG
RCTLDGRLVGTTPVSLSHVAKIRGTSNGTVINLTELDGTP
FHPFEGPAPIGFPDLGGCDWHINMTQFGHSSQTQYDVDTT
PDTFVPHLGSIQANGIGSGNYVGVLSWISPPSHPSGSQVD
LWKIPNYGSSITEATHLAPSVYPPGFGEVLVFFMSKMPGP
GAYNLPCLLPQEYISHLASEQAPTVGEAALLHYVDPDTGR
NLGEFKAYPDGFLTCVPNGASSGPQQLPINGVFVFVSWVS
RFYQLKPVGTAS
|
| B: |
SSVDGASGAGQLVPEVNASDPLAMDPVAGSSTAVATAGQV
NPIDPWIINNFVQAPQGEFTISPNNTPGDVLFDLSLGPHL
NPFLLHLSQMYNGWVGNMRVRIMLAGNAFTAGKIIVSCIP
PGFGSHNLTIAQATLFPHVIADVRTLDPIEVPLEDVRNVL
FHNNDRNQQTMRLVCMLYTPLRTGGGTGDSFVVAGRVMTC
PSPDFNFLFLVPPTVEQKTRPFTLPNLPLSSLSNSRAPLP
ISSMGISPDNVQSVQFQNGRCTLDGRLVGTTPVSLSHVAK
IRGTSNGTVINLTELDGTPFHPFEGPAPIGFPDLGGCDWH
INMTQFGHSSQTQYDVDTTPDTFVPHLGSIQANGIGSGNY
VGVLSWISPPSHPSGSQVDLWKIPNYGSSITEATHLAPSV
YPPGFGEVLVFFMSKMPGPGAYNLPCLLPQEYISHLASEQ
APTVGEAALLHYVDPDTGRNLGEFKAYPDGFLTCVPNGAS
SGPQQLPINGVFVFVSWVSRFYQLKPVGTAS
|
| C: |
DPLAMDPVAGSSTAVATAGQVNPIDPWIINNFVQAPQGEF
TISPNNTPGDVLFDLSLGPHLNPFLLHLSQMYNGWVGNMR
VRIMLAGNAFTAGKIIVSCIPPGFGSHNLTIAQATLFPHV
IADVRTLDPIEVPLEDVRNVLFHNNDRNQQTMRLVCMLYT
PLRTGGGTGDSFVVAGRVMTCPSPDFNFLFLVPPTVEQKT
RPFTLPNLPLSSLSNSRAPLPISSMGISPDNVQSVQFQNG
RCTLDGRLVGTTPVSLSHVAKIRGTSNGTVINLTELDGTP
FHPFEGPAPIGFPDLGGCDWHINMTQFGHSSQTQYDVDTT
PDTFVPHLGSIQANGIGSGNYVGVLSWISPPSHPSGSQVD
LWKIPNYGSSITEATHLAPSVYPPGFGEVLVFFMSKMPGP
GAYNLPCLLPQEYISHLASEQAPTVGEAALLHYVDPDTGR
NLGEFKAYPDGFLTCVPNGASSGPQQLPINGVFVFVSWVS
RFYQLKPVGTAS
|
|
|
Description
|
|
Functional site
|
|
|
1)
|
chain |
B |
| residue |
2227 |
| type |
SITE |
| sequence |
K
|
| description |
Cleavage; by host
|
| source |
Swiss-Prot : SWS_FT_FI1
|
|
|
2)
|
chain |
C |
| residue |
3227 |
| type |
SITE |
| sequence |
K
|
| description |
Cleavage; by host
|
| source |
Swiss-Prot : SWS_FT_FI1
|
|
|
3)
|
chain |
A |
| residue |
1227 |
| type |
SITE |
| sequence |
K
|
| description |
Cleavage; by host
|
| source |
Swiss-Prot : SWS_FT_FI1
|
|
|
|