|
|
eF-site ID
|
1ibl-L |
|
PDB Code
|
1ibl |
|
Chain
|
L |
|
click to enlarge
|
|
|
Title
|
STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT IN COMPLEX WITH A MESSENGER RNA FRAGMENT AND COGNATE TRANSFER RNA ANTICODON STEM-LOOP BOUND AT THE A SITE AND WITH THE ANTIBIOTIC PAROMOMYCIN |
|
Classification
|
RIBOSOME |
|
Compound
|
16S RIBOSOMAL RNA |
|
Source
|
ORGANISM_SCIENTIFIC: Thermus thermophilus; |
|
|
Sequence
|
L: |
PTINQLVRKGREKVRKKSKVPALKGAPFRRGVCTVVRTVT
PKKPNSALRKVAKVRLTSGYEVTAYIPGEGHNLQEHSVVL
IRGGRVKDLPGVRYHIVRGVYDAAGVKDRKKSRSKYGTKK
PKEA
|
|
|
Description
|
|
Functional site
|
|
|
1)
|
chain |
L |
| residue |
48 |
| type |
|
| sequence |
P
|
| description |
BINDING SITE FOR RESIDUE MG A 1604
|
| source |
: GC5
|
|
|
2)
|
chain |
L |
| residue |
49 |
| type |
|
| sequence |
N
|
| description |
BINDING SITE FOR RESIDUE MG A 1604
|
| source |
: GC5
|
|
|
3)
|
chain |
L |
| residue |
48 |
| type |
|
| sequence |
P
|
| description |
BINDING SITE FOR RESIDUE MG A 1613
|
| source |
: HC2
|
|
|
4)
|
chain |
L |
| residue |
46-53 |
| type |
prosite |
| sequence |
KKPNSALR
|
| description |
RIBOSOMAL_S12 Ribosomal protein S12 signature. KkPNSAlR
|
| source |
prosite : PS00055
|
|
|
5)
|
chain |
L |
| residue |
92 |
| type |
MOD_RES |
| sequence |
D
|
| description |
3-methylthioaspartic acid => ECO:0000269|PubMed:16287167, ECO:0000269|PubMed:25775268
|
| source |
Swiss-Prot : SWS_FT_FI2
|
|
|
|