eF-site ID 1hsb-ABC
PDB Code 1hsb
Chain A, B, C

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Title DIFFERENT LENGTH PEPTIDES BIND TO HLA-AW68 SIMILARLY AT THEIR ENDS BUT BULGE OUT IN THE MIDDLE
Classification IMMUNE SYSTEM
Compound MHC class I antigen
Source ORGANISM_COMMON: human; ORGANISM_SCIENTIFIC: Homo sapiens;
Sequence A:  GSHSMRYFYTSVSRPGRGEPRFIAVGYVDDTQFVRFDSDA
ASQRMEPRAPWIEQEGPEYWDRNTRNVKAQSQTDRVDLGT
LRGYYNQSEAGSHTIQMMYGCDVGSDGRFLRGYRQDAYDG
KDYIALKEDLRSWTAADMAAQTTKHKWEAAHVAEQWRAYL
EGTCVEWLRRYLENGKETLQRTDAPKTHMTHHAVSDHEAT
LRCWALSFYPAEITLTWQRDGEDQTQDTELVETRPAGDGT
FQKWVAVVVPSGQEQRYTCHVQHEGLPKPL
B:  IQRTPKIQVYSRHPAENGKSNFLNCYVSGFHPSDIEVDLL
KNGERIEKVEHSDLSFSKDWSFYLLYYTEFTPTEKDEYAC
RVNHVTLSQPKIVKWDRDM
C:  AVA
Description


Functional site

1) chain A
residue 147
type
sequence W
description BINDING SITE FOR RESIDUE ALA A 1001
source : AC1

2) chain A
residue 74
type
sequence D
description BINDING SITE FOR RESIDUE ARG A 1002
source : AC2

3) chain A
residue 77
type
sequence D
description BINDING SITE FOR RESIDUE ARG A 1002
source : AC2

4) chain A
residue 80
type
sequence T
description BINDING SITE FOR RESIDUE ARG A 1002
source : AC2

5) chain A
residue 84
type
sequence Y
description BINDING SITE FOR RESIDUE ARG A 1002
source : AC2

6) chain A
residue 95
type
sequence I
description BINDING SITE FOR RESIDUE ARG A 1002
source : AC2

7) chain A
residue 116
type
sequence D
description BINDING SITE FOR RESIDUE ARG A 1002
source : AC2

8) chain A
residue 143
type
sequence T
description BINDING SITE FOR RESIDUE ARG A 1002
source : AC2

9) chain A
residue 146
type
sequence K
description BINDING SITE FOR RESIDUE ARG A 1002
source : AC2

10) chain A
residue 147
type
sequence W
description BINDING SITE FOR RESIDUE ARG A 1002
source : AC2

11) chain B
residue 78-84
type prosite
sequence YACRVNH
description IG_MHC Immunoglobulins and major histocompatibility complex proteins signature. YACRVNH
source prosite : PS00290

12) chain A
residue 257-263
type prosite
sequence YTCHVQH
description IG_MHC Immunoglobulins and major histocompatibility complex proteins signature. YACRVNH
source prosite : PS00290

13) chain A
residue 7
type BINDING
sequence Y
description BINDING => ECO:0000269|PubMed:21943705
source Swiss-Prot : SWS_FT_FI1

14) chain A
residue 73
type BINDING
sequence T
description BINDING => ECO:0000269|PubMed:21943705
source Swiss-Prot : SWS_FT_FI1

15) chain A
residue 84
type BINDING
sequence Y
description BINDING => ECO:0000269|PubMed:21943705
source Swiss-Prot : SWS_FT_FI1

16) chain A
residue 143
type BINDING
sequence T
description BINDING => ECO:0000269|PubMed:21943705
source Swiss-Prot : SWS_FT_FI1

17) chain A
residue 146
type BINDING
sequence K
description BINDING => ECO:0000269|PubMed:21943705
source Swiss-Prot : SWS_FT_FI1

18) chain A
residue 171
type BINDING
sequence Y
description BINDING => ECO:0000269|PubMed:21943705
source Swiss-Prot : SWS_FT_FI1

19) chain A
residue 116
type BINDING
sequence D
description BINDING => ECO:0000269|PubMed:21543847
source Swiss-Prot : SWS_FT_FI2

20) chain A
residue 159
type BINDING
sequence Y
description BINDING => ECO:0000269|PubMed:21543847
source Swiss-Prot : SWS_FT_FI2

21) chain A
residue 59
type MOD_RES
sequence Y
description Sulfotyrosine => ECO:0000255
source Swiss-Prot : SWS_FT_FI3

22) chain B
residue 41
type MOD_RES
sequence K
description Sulfotyrosine => ECO:0000255
source Swiss-Prot : SWS_FT_FI3

23) chain B
residue 48
type MOD_RES
sequence K
description Sulfotyrosine => ECO:0000255
source Swiss-Prot : SWS_FT_FI3

24) chain B
residue 58
type MOD_RES
sequence K
description Sulfotyrosine => ECO:0000255
source Swiss-Prot : SWS_FT_FI3

25) chain B
residue 91
type MOD_RES
sequence K
description Sulfotyrosine => ECO:0000255
source Swiss-Prot : SWS_FT_FI3

26) chain B
residue 94
type MOD_RES
sequence K
description Sulfotyrosine => ECO:0000255
source Swiss-Prot : SWS_FT_FI3

27) chain A
residue 86
type CARBOHYD
sequence N
description N-linked (GlcNAc...) asparagine => ECO:0000269|PubMed:19159218
source Swiss-Prot : SWS_FT_FI4


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