eF-site ID 1hmv-E
PDB Code 1hmv
Chain E

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Title THE STRUCTURE OF UNLIGANDED REVERSE TRANSCRIPTASE FROM THE HUMAN IMMUNODEFICIENCY VIRUS TYPE 1
Classification NUCLEOTIDYLTRANSFERASE
Compound HIV-1 REVERSE TRANSCRIPTASE (SUBUNIT P66)
Source Human immunodeficiency virus type 1 group M subtype B (isolate BH10) (HIV-1) (POL_HV1B1)
Sequence E:  PISPIETVPVKLKPGMDGPKVKQWPLTEEKIKALVEICTE
MEKEGKISKIGPENPYNTPVFAIVDFRELNKRTQDFWEVQ
LGIPHPAGLKKKKSVTVLDVGDAYFSVPLDEDFRKYTAFT
IPGIRYQYNVLPQGWKGSPAIFQSSMTKILEPFKKQNPDI
VIYQYMDDLYVGSDLEIGQHRTKIEELRQHLLRWGLTTPD
KKHQKEPPFLWMGYELHPDKWTVQPIVLPEKDSWTVNDIQ
KLVGKLNWASQIYPGIKVRQLCKLLRGTKALTEVIPLTEE
AELELAENREILKEPVHGVYYDPSKDLIAEIQKQGQGQWT
YQIYQEPFKNLKTGKYARMRGAHTNDVKQLTEAVQKITTE
SIVIWGKTPKFKLPIQKETWETWWTEYWQATWIPEWEFVN
TPPLVKLWYQLEKEPIVGAETFYVDGAANRETKLGKAGYV
TNKGRQKVVPLTNTTNQKTELQAIYLALQDSGLEVNIVTD
SQYALGIIQAQPDKSESELVNQIIEQLIKKEKVYLAWVPA
HKGIGGNEQVDKLVSA
Description


Functional site

1) chain E
residue 443
type
sequence D
description BINDING SITE FOR RESIDUE MG F 501
source : AC3

2) chain E
residue 478
type
sequence E
description BINDING SITE FOR RESIDUE MG F 501
source : AC3

3) chain E
residue 498
type
sequence D
description BINDING SITE FOR RESIDUE MG F 501
source : AC3

4) chain E
residue 220
type MOD_RES
sequence K
description Asymmetric dimethylarginine; in Nucleocapsid protein p7; by host PRMT6 => ECO:0000269|PubMed:17415034
source Swiss-Prot : SWS_FT_FI10

5) chain E
residue 242
type MOD_RES
sequence Q
description Asymmetric dimethylarginine; in Nucleocapsid protein p7; by host PRMT6 => ECO:0000269|PubMed:17415034
source Swiss-Prot : SWS_FT_FI10

6) chain E
residue 273
type SITE
sequence G
description Cleavage; by viral protease => ECO:0000269|PubMed:2476069
source Swiss-Prot : SWS_FT_FI8

7) chain E
residue 333
type SITE
sequence G
description Cleavage; by viral protease => ECO:0000269|PubMed:2476069
source Swiss-Prot : SWS_FT_FI8

8) chain E
residue 196
type SITE
sequence G
description Cleavage; by viral protease => ECO:0000255
source Swiss-Prot : SWS_FT_FI6

9) chain E
residue 210
type SITE
sequence L
description Cleavage; by viral protease => ECO:0000255
source Swiss-Prot : SWS_FT_FI6


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