eF-site ID 1h6f-ABCD
PDB Code 1h6f
Chain A, B, C, D

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Title Human TBX3, a transcription factor responsible for ulnar-mammary syndrome, bound to a palindromic DNA site
Classification TRANSCRIPTION FACTOR
Compound T-BOX TRANSCRIPTION FACTOR TBX3
Source Homo sapiens (Human) (1H6F)
Sequence A:  DPKVHLEAKELWDQFHKRGTEMVITKSGRRMFPPFKVRCS
GLDKKAKYILLMDIIAADDCRYKFHNSRWMVAGKADPEMP
KRMYIHPDSPATGEQWMSKVVTFHKLKLTNNISDKHGFTI
LNSMHKYQPRFHIVRANDILKLPYSTFRTYLFPETEFIAV
TAYQNDKITQLKIDNNPFAKGFRD
B:  KDDPKVHLEAKELWDQFHKRGTEMVITKSGRRMFPPFKVR
CSGLDKKAKYILLMDIIAADDCRYKFHNSRWMVAGKADPE
MPKRMYIHPDSPATGEQWMSKVVTFHKLKLTNNISDKHGF
TILNSMHKYQPRFHIVRANDILKLPYSTFRTYLFPETEFI
AVTAYQNDKITQLKIDNNPFAKGFRD
C:  TAATTTCACACCTAGGTGTGAAAT
D:  TAATTTCACACCTAGGTGTGAAAT
Description


Functional site

1) chain A
residue 107-220
type DNA_BIND
sequence LEAKELWDQFHKRGTEMVITKSGRRMFPPFKVRCSGLDKK
AKYILLMDIIAADDCRYKFHNSRWMVAGKADPEMPKRMYI
HPDSPATGEQWMSKVVTFHKLKLTNNISDKHGFT
description T-box; first part => ECO:0000255|PROSITE-ProRule:PRU00201
source Swiss-Prot : SWS_FT_FI1

2) chain B
residue 107-220
type DNA_BIND
sequence LEAKELWDQFHKRGTEMVITKSGRRMFPPFKVRCSGLDKK
AKYILLMDIIAADDCRYKFHNSRWMVAGKADPEMPKRMYI
HPDSPATGEQWMSKVVTFHKLKLTNNISDKHGFT
description T-box; first part => ECO:0000255|PROSITE-ProRule:PRU00201
source Swiss-Prot : SWS_FT_FI1

3) chain A
residue 186-204
type prosite
sequence IHPDSPATGEQWMSKVVTF
description TBOX_2 T-box domain signature 2. IHPDSpatGeqWMskvVtF
source prosite : PS01264

4) chain A
residue 112-131
type prosite
sequence LWDQFHKRGTEMVITKSGRR
description TBOX_1 T-box domain signature 1. LWdqFhkrgTEMVITksGRR
source prosite : PS01283


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