|
eF-site ID
|
1h6f-ABCD |
PDB Code
|
1h6f |
Chain
|
A, B, C, D |
|
click to enlarge
|
|
Title
|
Human TBX3, a transcription factor responsible for ulnar-mammary syndrome, bound to a palindromic DNA site |
Classification
|
TRANSCRIPTION FACTOR |
Compound
|
T-BOX TRANSCRIPTION FACTOR TBX3 |
Source
|
Homo sapiens (Human) (1H6F) |
|
Sequence
|
A: |
DPKVHLEAKELWDQFHKRGTEMVITKSGRRMFPPFKVRCS
GLDKKAKYILLMDIIAADDCRYKFHNSRWMVAGKADPEMP
KRMYIHPDSPATGEQWMSKVVTFHKLKLTNNISDKHGFTI
LNSMHKYQPRFHIVRANDILKLPYSTFRTYLFPETEFIAV
TAYQNDKITQLKIDNNPFAKGFRD
|
B: |
KDDPKVHLEAKELWDQFHKRGTEMVITKSGRRMFPPFKVR
CSGLDKKAKYILLMDIIAADDCRYKFHNSRWMVAGKADPE
MPKRMYIHPDSPATGEQWMSKVVTFHKLKLTNNISDKHGF
TILNSMHKYQPRFHIVRANDILKLPYSTFRTYLFPETEFI
AVTAYQNDKITQLKIDNNPFAKGFRD
|
C: |
TAATTTCACACCTAGGTGTGAAAT
|
D: |
TAATTTCACACCTAGGTGTGAAAT
|
|
Description
|
|
Functional site
|
|
1)
|
chain |
A |
residue |
107-220 |
type |
DNA_BIND |
sequence |
LEAKELWDQFHKRGTEMVITKSGRRMFPPFKVRCSGLDKK
AKYILLMDIIAADDCRYKFHNSRWMVAGKADPEMPKRMYI
HPDSPATGEQWMSKVVTFHKLKLTNNISDKHGFT
|
description |
T-box; first part => ECO:0000255|PROSITE-ProRule:PRU00201
|
source |
Swiss-Prot : SWS_FT_FI1
|
|
2)
|
chain |
B |
residue |
107-220 |
type |
DNA_BIND |
sequence |
LEAKELWDQFHKRGTEMVITKSGRRMFPPFKVRCSGLDKK
AKYILLMDIIAADDCRYKFHNSRWMVAGKADPEMPKRMYI
HPDSPATGEQWMSKVVTFHKLKLTNNISDKHGFT
|
description |
T-box; first part => ECO:0000255|PROSITE-ProRule:PRU00201
|
source |
Swiss-Prot : SWS_FT_FI1
|
|
3)
|
chain |
A |
residue |
186-204 |
type |
prosite |
sequence |
IHPDSPATGEQWMSKVVTF
|
description |
TBOX_2 T-box domain signature 2. IHPDSpatGeqWMskvVtF
|
source |
prosite : PS01264
|
|
4)
|
chain |
A |
residue |
112-131 |
type |
prosite |
sequence |
LWDQFHKRGTEMVITKSGRR
|
description |
TBOX_1 T-box domain signature 1. LWdqFhkrgTEMVITksGRR
|
source |
prosite : PS01283
|
|
|
|