eF-site ID 1h2u-Y
PDB Code 1h2u
Chain Y

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Title Structure of the human nuclear cap-binding-complex (CBC) in complex with a cap analogue m7GpppG
Classification NUCLEAR PROTEIN
Compound 80 KDA NUCLEAR CAP BINDING PROTEIN
Source (CB20_HUMAN)
Sequence Y:  LLKALRSDSYVELSQYRDQHFRGDNEEQEKLLKKSCTLYV
GNLSFYTTEEQIYELFSKSGDIKKIIMGLDKMKKTACGFC
FVEYYSRADAENAMRYINGTRLDDRIIRTDWDAGFKEGRQ
YGRGRSGGQVRDEYRQDYDAGRGGYGK
Description


Functional site

1) chain Y
residue 19
type
sequence Q
description BINDING SITE FOR RESIDUE GDP X1153
source : AC1

2) chain Y
residue 21
type
sequence R
description BINDING SITE FOR RESIDUE GDP X1153
source : AC1

3) chain Y
residue 23
type
sequence Q
description BINDING SITE FOR RESIDUE GDP X1153
source : AC1

4) chain Y
residue 29
type
sequence N
description BINDING SITE FOR RESIDUE GDP X1153
source : AC1

5) chain Y
residue 20
type
sequence Y
description BINDING SITE FOR RESIDUE GDP Y1152
source : AC3

6) chain Y
residue 127
type
sequence R
description BINDING SITE FOR RESIDUE GDP Y1152
source : AC3

7) chain Y
residue 134
type
sequence V
description BINDING SITE FOR RESIDUE GDP Y1152
source : AC3

8) chain Y
residue 135
type
sequence R
description BINDING SITE FOR RESIDUE GDP Y1152
source : AC3

9) chain Y
residue 138
type
sequence Y
description BINDING SITE FOR RESIDUE GDP Y1152
source : AC3

10) chain Y
residue 20
type
sequence Y
description BINDING SITE FOR RESIDUE 7MG Y1153
source : AC4

11) chain Y
residue 43
type
sequence Y
description BINDING SITE FOR RESIDUE 7MG Y1153
source : AC4

12) chain Y
residue 83
type
sequence F
description BINDING SITE FOR RESIDUE 7MG Y1153
source : AC4

13) chain Y
residue 112
type
sequence R
description BINDING SITE FOR RESIDUE 7MG Y1153
source : AC4

14) chain Y
residue 114
type
sequence D
description BINDING SITE FOR RESIDUE 7MG Y1153
source : AC4

15) chain Y
residue 115
type
sequence W
description BINDING SITE FOR RESIDUE 7MG Y1153
source : AC4

16) chain Y
residue 116
type
sequence D
description BINDING SITE FOR RESIDUE 7MG Y1153
source : AC4

17) chain Y
residue 123
type
sequence R
description BINDING SITE FOR RESIDUE 7MG Y1153
source : AC4

18) chain Y
residue 125
type
sequence Y
description BINDING SITE FOR RESIDUE 7MG Y1153
source : AC4

19) chain Y
residue 126
type
sequence G
description BINDING SITE FOR RESIDUE 7MG Y1153
source : AC4

20) chain Y
residue 127
type
sequence R
description BINDING SITE FOR RESIDUE 7MG Y1153
source : AC4

21) chain Y
residue 133
type
sequence Q
description BINDING SITE FOR RESIDUE 7MG Y1153
source : AC4

22) chain Y
residue 134
type
sequence V
description BINDING SITE FOR RESIDUE 7MG Y1153
source : AC4

23) chain Y
residue 135
type
sequence R
description BINDING SITE FOR RESIDUE 7MG Y1153
source : AC4

24) chain Y
residue 18
type MOD_RES
sequence S
description Phosphoserine => ECO:0007744|PubMed:17525332
source Swiss-Prot : SWS_FT_FI5

25) chain Y
residue 112
type BINDING
sequence R
description
source Swiss-Prot : SWS_FT_FI2

26) chain Y
residue 123
type BINDING
sequence R
description
source Swiss-Prot : SWS_FT_FI2

27) chain Y
residue 133
type BINDING
sequence Q
description
source Swiss-Prot : SWS_FT_FI2

28) chain Y
residue 13
type MOD_RES
sequence S
description Phosphoserine => ECO:0007744|PubMed:23186163
source Swiss-Prot : SWS_FT_FI4

29) chain Y
residue 20
type BINDING
sequence Y
description BINDING => ECO:0000269|PubMed:12374755, ECO:0000269|PubMed:12434151
source Swiss-Prot : SWS_FT_FI1

30) chain Y
residue 43
type BINDING
sequence Y
description BINDING => ECO:0000269|PubMed:12374755, ECO:0000269|PubMed:12434151
source Swiss-Prot : SWS_FT_FI1

31) chain Y
residue 146
type MOD_RES
sequence R
description Omega-N-methylarginine => ECO:0007744|PubMed:24129315
source Swiss-Prot : SWS_FT_FI6


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