eF-site ID 1gy3-C
PDB Code 1gy3
Chain C

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Title pCDK2/cyclin A in complex with MgADP, nitrate and peptide substrate
Classification TRANSFERASE/TRANSFERASE SUBSTRATE
Compound CELL DIVISION PROTEIN KINASE 2
Source (1GY3)
Sequence C:  MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTE
TEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVF
EFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS
HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYX
HEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRR
ALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF
PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAA
LAHPFFQDVTKPVPHL
Description


Functional site

1) chain C
residue 23
type
sequence N
description BINDING SITE FOR RESIDUE GOL C 1297
source : AC5

2) chain C
residue 28
type
sequence E
description BINDING SITE FOR RESIDUE GOL C 1297
source : AC5

3) chain C
residue 68
type
sequence D
description BINDING SITE FOR RESIDUE GOL C 1297
source : AC5

4) chain C
residue 13
type
sequence G
description BINDING SITE FOR RESIDUE ATP C 1298
source : AC6

5) chain C
residue 31
type
sequence A
description BINDING SITE FOR RESIDUE ATP C 1298
source : AC6

6) chain C
residue 33
type
sequence K
description BINDING SITE FOR RESIDUE ATP C 1298
source : AC6

7) chain C
residue 80
type
sequence F
description BINDING SITE FOR RESIDUE ATP C 1298
source : AC6

8) chain C
residue 81
type
sequence E
description BINDING SITE FOR RESIDUE ATP C 1298
source : AC6

9) chain C
residue 82
type
sequence F
description BINDING SITE FOR RESIDUE ATP C 1298
source : AC6

10) chain C
residue 83
type
sequence L
description BINDING SITE FOR RESIDUE ATP C 1298
source : AC6

11) chain C
residue 86
type
sequence D
description BINDING SITE FOR RESIDUE ATP C 1298
source : AC6

12) chain C
residue 131
type
sequence Q
description BINDING SITE FOR RESIDUE ATP C 1298
source : AC6

13) chain C
residue 132
type
sequence N
description BINDING SITE FOR RESIDUE ATP C 1298
source : AC6

14) chain C
residue 145
type
sequence D
description BINDING SITE FOR RESIDUE ATP C 1298
source : AC6

15) chain C
residue 132
type
sequence N
description BINDING SITE FOR RESIDUE MG C 1299
source : AC7

16) chain C
residue 145
type
sequence D
description BINDING SITE FOR RESIDUE MG C 1299
source : AC7

17) chain C
residue 127
type
sequence D
description BINDING SITE FOR RESIDUE NO3 C 1300
source : AC8

18) chain C
residue 129
type
sequence K
description BINDING SITE FOR RESIDUE NO3 C 1300
source : AC8

19) chain C
residue 145
type
sequence D
description BINDING SITE FOR RESIDUE NO3 C 1300
source : AC8

20) chain C
residue 15
type
sequence Y
description BINDING SITE FOR CHAIN F OF SUBSTRATE PEPTIDE
source : BC1

21) chain C
residue 50
type
sequence R
description BINDING SITE FOR CHAIN F OF SUBSTRATE PEPTIDE
source : BC1

22) chain C
residue 127
type
sequence D
description BINDING SITE FOR CHAIN F OF SUBSTRATE PEPTIDE
source : BC1

23) chain C
residue 129
type
sequence K
description BINDING SITE FOR CHAIN F OF SUBSTRATE PEPTIDE
source : BC1

24) chain C
residue 148
type
sequence L
description BINDING SITE FOR CHAIN F OF SUBSTRATE PEPTIDE
source : BC1

25) chain C
residue 160
type
sequence X
description BINDING SITE FOR CHAIN F OF SUBSTRATE PEPTIDE
source : BC1

26) chain C
residue 162
type
sequence E
description BINDING SITE FOR CHAIN F OF SUBSTRATE PEPTIDE
source : BC1

27) chain C
residue 163
type
sequence V
description BINDING SITE FOR CHAIN F OF SUBSTRATE PEPTIDE
source : BC1

28) chain C
residue 164
type
sequence V
description BINDING SITE FOR CHAIN F OF SUBSTRATE PEPTIDE
source : BC1

29) chain C
residue 165
type
sequence T
description BINDING SITE FOR CHAIN F OF SUBSTRATE PEPTIDE
source : BC1

30) chain C
residue 166
type
sequence L
description BINDING SITE FOR CHAIN F OF SUBSTRATE PEPTIDE
source : BC1

31) chain C
residue 167
type
sequence W
description BINDING SITE FOR CHAIN F OF SUBSTRATE PEPTIDE
source : BC1

32) chain C
residue 169
type
sequence R
description BINDING SITE FOR CHAIN F OF SUBSTRATE PEPTIDE
source : BC1

33) chain C
residue 205
type
sequence G
description BINDING SITE FOR CHAIN F OF SUBSTRATE PEPTIDE
source : BC1

34) chain C
residue 127
type ACT_SITE
sequence D
description Proton acceptor
source Swiss-Prot : SWS_FT_FI1

35) chain C
residue 9
type SITE
sequence K
description CDK7 binding
source Swiss-Prot : SWS_FT_FI4

36) chain C
residue 88
type SITE
sequence K
description CDK7 binding
source Swiss-Prot : SWS_FT_FI4

37) chain C
residue 166
type SITE
sequence L
description CDK7 binding
source Swiss-Prot : SWS_FT_FI4

38) chain C
residue 129
type BINDING
sequence K
description BINDING => ECO:0000255|PROSITE-ProRule:PRU00159, ECO:0000269|PubMed:17095507, ECO:0000269|PubMed:21565702
source Swiss-Prot : SWS_FT_FI2

39) chain C
residue 10
type BINDING
sequence I
description BINDING => ECO:0000255|PROSITE-ProRule:PRU00159, ECO:0000269|PubMed:17095507, ECO:0000269|PubMed:21565702
source Swiss-Prot : SWS_FT_FI2

40) chain C
residue 33
type BINDING
sequence K
description BINDING => ECO:0000255|PROSITE-ProRule:PRU00159, ECO:0000269|PubMed:17095507, ECO:0000269|PubMed:21565702
source Swiss-Prot : SWS_FT_FI2

41) chain C
residue 81
type BINDING
sequence E
description BINDING => ECO:0000255|PROSITE-ProRule:PRU00159, ECO:0000269|PubMed:17095507, ECO:0000269|PubMed:21565702
source Swiss-Prot : SWS_FT_FI2

42) chain C
residue 86
type BINDING
sequence D
description BINDING => ECO:0000255|PROSITE-ProRule:PRU00159, ECO:0000269|PubMed:17095507, ECO:0000269|PubMed:21565702
source Swiss-Prot : SWS_FT_FI2

43) chain C
residue 1
type MOD_RES
sequence M
description N-acetylmethionine => ECO:0007744|PubMed:22814378
source Swiss-Prot : SWS_FT_FI5

44) chain C
residue 160
type MOD_RES
sequence X
description Phosphothreonine; by CAK and CCRK => ECO:0000269|PubMed:1396589, ECO:0000269|PubMed:14597612, ECO:0000269|PubMed:16325401, ECO:0000269|PubMed:17095507, ECO:0000269|PubMed:17570665, ECO:0000269|PubMed:20147522, ECO:0000269|PubMed:20360007, ECO:0000269|PubMed:21565702, ECO:0000305|PubMed:28666995
source Swiss-Prot : SWS_FT_FI10

45) chain C
residue 132
type BINDING
sequence N
description BINDING => ECO:0000269|PubMed:21565702
source Swiss-Prot : SWS_FT_FI3

46) chain C
residue 145
type BINDING
sequence D
description BINDING => ECO:0000269|PubMed:21565702
source Swiss-Prot : SWS_FT_FI3

47) chain C
residue 6
type MOD_RES
sequence K
description N6-acetyllysine => ECO:0007744|PubMed:19608861
source Swiss-Prot : SWS_FT_FI6

48) chain C
residue 14
type MOD_RES
sequence T
description Phosphothreonine => ECO:0000269|PubMed:1396589, ECO:0000269|PubMed:17095507
source Swiss-Prot : SWS_FT_FI7

49) chain C
residue 15
type MOD_RES
sequence Y
description Phosphotyrosine; by WEE1 => ECO:0000269|PubMed:1396589, ECO:0000269|PubMed:17095507, ECO:0007744|PubMed:19690332
source Swiss-Prot : SWS_FT_FI8

50) chain C
residue 19
type MOD_RES
sequence Y
description Phosphotyrosine => ECO:0007744|PubMed:19369195
source Swiss-Prot : SWS_FT_FI9


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