eF-site ID 1gvn-ABCD
PDB Code 1gvn
Chain A, B, C, D

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Title Crystal Structure of the Plasmid Maintenance System epsilon/zeta: Meachnism of toxin inactivation and toxin function
Classification POSTSEGREGATIONAL KILLING SYSTEM
Compound EPSILON
Source ORGANISM_SCIENTIFIC: STREPTOCOCCUS PYOGENES;
Sequence A:  VTYEKTFEIEIINELSASVYNRVLNYVLNHELNKNDSQLL
EVNLLNQLKLAKRVNLFDYSLEELQAVHEYWRSMNRYSKQ
VLNKEKVA
B:  ANIVNFTDKQFENRLNDNLEELIQGKKAVESPTAFLLGGQ
PGSGKTSLRSAIFEETQGNVIVIDNDTFKQQHPNFDELVK
LYEKDVVKHVTPYSNRMTEAIISRLSDQGYNLVIEGTGRT
TDVPIQTATMLQAKGYETKMYVMAVPKINSYLGTIERYET
MYADDPMTARATPKQAHDIVVKNLPTNLETLHKTGLFSDI
RLYNREGVKLYSSLETPSISPKETLEKELNRKVSGKEIQP
TLERIEQKMVLNKHQETPEFKAIQQKLESLQPP
C:  AVTYEKTFEIEIINELSASVYNRVLNYVLNHELNKNDSQL
LEVNLLNQLKLAKRVNLFDYSLEELQAVHEYWRSMNRYSK
QVLNKE
D:  ANIVNFTDKQFENRLNDNLEELIQGKKAVESPTAFLLGGQ
PGSGKTSLRSAIFEETQGNVIVIDNDTFKQQHPNFDELVK
LYEKDVVKHVTPYSNRMTEAIISRLSDQGYNLVIEGTGRT
TDVPIQTATMLQAKGYETKMYVMAVPKINSYLGTIERYET
MYADDPMTARATPKQAHDIVVKNLPTNLETLHKTGLFSDI
RLYNREGVKLYSSLETPSISPKETLEKELNRKVSGKEIQP
TLERIEQKMVLNKHQETPEFKAIQQKLESLQ
Description (1)  EPSILON, ZETA


Functional site

1) chain B
residue 42
type
sequence P
description BINDING SITE FOR RESIDUE SO4 B 602
source : AC1

2) chain B
residue 43
type
sequence G
description BINDING SITE FOR RESIDUE SO4 B 602
source : AC1

3) chain B
residue 44
type
sequence S
description BINDING SITE FOR RESIDUE SO4 B 602
source : AC1

4) chain B
residue 45
type
sequence G
description BINDING SITE FOR RESIDUE SO4 B 602
source : AC1

5) chain B
residue 46
type
sequence K
description BINDING SITE FOR RESIDUE SO4 B 602
source : AC1

6) chain D
residue 42
type
sequence P
description BINDING SITE FOR RESIDUE SO4 D 603
source : AC2

7) chain D
residue 43
type
sequence G
description BINDING SITE FOR RESIDUE SO4 D 603
source : AC2

8) chain D
residue 44
type
sequence S
description BINDING SITE FOR RESIDUE SO4 D 603
source : AC2

9) chain D
residue 45
type
sequence G
description BINDING SITE FOR RESIDUE SO4 D 603
source : AC2

10) chain D
residue 46
type
sequence K
description BINDING SITE FOR RESIDUE SO4 D 603
source : AC2

11) chain B
residue 67
type ACT_SITE
sequence D
description Proton acceptor => ECO:0000305
source Swiss-Prot : SWS_FT_FI1

12) chain D
residue 67
type ACT_SITE
sequence D
description Proton acceptor => ECO:0000305
source Swiss-Prot : SWS_FT_FI1

13) chain B
residue 40
type BINDING
sequence G
description BINDING => ECO:0000305|PubMed:12571357
source Swiss-Prot : SWS_FT_FI2

14) chain D
residue 40
type BINDING
sequence G
description BINDING => ECO:0000305|PubMed:12571357
source Swiss-Prot : SWS_FT_FI2

15) chain B
residue 66
type BINDING
sequence N
description
source Swiss-Prot : SWS_FT_FI3

16) chain D
residue 128
type BINDING
sequence T
description
source Swiss-Prot : SWS_FT_FI3

17) chain B
residue 100
type BINDING
sequence E
description
source Swiss-Prot : SWS_FT_FI3

18) chain B
residue 118
type BINDING
sequence T
description
source Swiss-Prot : SWS_FT_FI3

19) chain B
residue 120
type BINDING
sequence R
description
source Swiss-Prot : SWS_FT_FI3

20) chain B
residue 128
type BINDING
sequence T
description
source Swiss-Prot : SWS_FT_FI3

21) chain D
residue 66
type BINDING
sequence N
description
source Swiss-Prot : SWS_FT_FI3

22) chain D
residue 100
type BINDING
sequence E
description
source Swiss-Prot : SWS_FT_FI3

23) chain D
residue 118
type BINDING
sequence T
description
source Swiss-Prot : SWS_FT_FI3

24) chain D
residue 120
type BINDING
sequence R
description
source Swiss-Prot : SWS_FT_FI3


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