eF-site ID 1gkc-AB
PDB Code 1gkc
Chain A, B

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Title MMP9-inhibitor complex
Classification HYDROLASE/HYDROLASE INHIBITOR
Compound 92 KDA TYPE IV COLLAGENASE
Source Homo sapiens (Human) (MM09_HUMAN)
Sequence A:  FEGDLKWHHHNITYWIQNYSEDLPRAVIDDAFARAFALWS
AVTPLTFTRVYSRDADIVIQFGVAEHGDGYPFDGKDGLLA
HAFPPGPGIQGDAHFDDDELWSLGKGQGYSLFLVAAHEFG
HALGLDHSSVPEALMYPMYRFTEGPPLHKDDVNGIRHLY
B:  DLKWHHHNITYWIQNYSEDLPRAVIDDAFARAFALWSAVT
PLTFTRVYSRDADIVIQFGVAEHGDGYPFDGKDGLLAHAF
PPGPGIQGDAHFDDDELWSLGKGQGYSLFLVAAHEFGHAL
GLDHSSVPEALMYPMYRFTEGPPLHKDDVNGIRHLY
Description


Functional site

1) chain A
residue 182
type
sequence D
description BINDING SITE FOR RESIDUE CA A 1444
source : AC1

2) chain A
residue 183
type
sequence G
description BINDING SITE FOR RESIDUE CA A 1444
source : AC1

3) chain A
residue 185
type
sequence D
description BINDING SITE FOR RESIDUE CA A 1444
source : AC1

4) chain A
residue 187
type
sequence L
description BINDING SITE FOR RESIDUE CA A 1444
source : AC1

5) chain A
residue 205
type
sequence D
description BINDING SITE FOR RESIDUE CA A 1444
source : AC1

6) chain A
residue 208
type
sequence E
description BINDING SITE FOR RESIDUE CA A 1444
source : AC1

7) chain A
residue 165
type
sequence D
description BINDING SITE FOR RESIDUE CA A 1445
source : AC2

8) chain A
residue 197
type
sequence G
description BINDING SITE FOR RESIDUE CA A 1445
source : AC2

9) chain A
residue 199
type
sequence Q
description BINDING SITE FOR RESIDUE CA A 1445
source : AC2

10) chain A
residue 201
type
sequence D
description BINDING SITE FOR RESIDUE CA A 1445
source : AC2

11) chain A
residue 131
type
sequence D
description BINDING SITE FOR RESIDUE CA A 1446
source : AC3

12) chain A
residue 206
type
sequence D
description BINDING SITE FOR RESIDUE CA A 1446
source : AC3

13) chain A
residue 208
type
sequence E
description BINDING SITE FOR RESIDUE CA A 1446
source : AC3

14) chain A
residue 211
type
sequence S
description BINDING SITE FOR RESIDUE CA A 1447
source : AC4

15) chain A
residue 212
type
sequence L
description BINDING SITE FOR RESIDUE CA A 1447
source : AC4

16) chain A
residue 213
type
sequence G
description BINDING SITE FOR RESIDUE CA A 1447
source : AC4

17) chain A
residue 214
type
sequence K
description BINDING SITE FOR RESIDUE CA A 1447
source : AC4

18) chain A
residue 215
type
sequence G
description BINDING SITE FOR RESIDUE CA A 1447
source : AC4

19) chain A
residue 186
type
sequence G
description BINDING SITE FOR RESIDUE NFH A 1448
source : AC5

20) chain A
residue 187
type
sequence L
description BINDING SITE FOR RESIDUE NFH A 1448
source : AC5

21) chain A
residue 188
type
sequence L
description BINDING SITE FOR RESIDUE NFH A 1448
source : AC5

22) chain A
residue 189
type
sequence A
description BINDING SITE FOR RESIDUE NFH A 1448
source : AC5

23) chain A
residue 393
type
sequence Y
description BINDING SITE FOR RESIDUE NFH A 1448
source : AC5

24) chain A
residue 401
type
sequence H
description BINDING SITE FOR RESIDUE NFH A 1448
source : AC5

25) chain A
residue 402
type
sequence E
description BINDING SITE FOR RESIDUE NFH A 1448
source : AC5

26) chain A
residue 405
type
sequence H
description BINDING SITE FOR RESIDUE NFH A 1448
source : AC5

27) chain A
residue 411
type
sequence H
description BINDING SITE FOR RESIDUE NFH A 1448
source : AC5

28) chain A
residue 421
type
sequence P
description BINDING SITE FOR RESIDUE NFH A 1448
source : AC5

29) chain A
residue 422
type
sequence M
description BINDING SITE FOR RESIDUE NFH A 1448
source : AC5

30) chain A
residue 423
type
sequence Y
description BINDING SITE FOR RESIDUE NFH A 1448
source : AC5

31) chain A
residue 401
type
sequence H
description BINDING SITE FOR RESIDUE ZN A 1450
source : AC6

32) chain A
residue 405
type
sequence H
description BINDING SITE FOR RESIDUE ZN A 1450
source : AC6

33) chain A
residue 411
type
sequence H
description BINDING SITE FOR RESIDUE ZN A 1450
source : AC6

34) chain A
residue 175
type
sequence H
description BINDING SITE FOR RESIDUE ZN A 1451
source : AC7

35) chain A
residue 177
type
sequence D
description BINDING SITE FOR RESIDUE ZN A 1451
source : AC7

36) chain A
residue 190
type
sequence H
description BINDING SITE FOR RESIDUE ZN A 1451
source : AC7

37) chain A
residue 203
type
sequence H
description BINDING SITE FOR RESIDUE ZN A 1451
source : AC7

38) chain A
residue 149
type
sequence S
description BINDING SITE FOR RESIDUE CA A 1452
source : AC8

39) chain B
residue 182
type
sequence D
description BINDING SITE FOR RESIDUE CA B 1444
source : AC9

40) chain B
residue 183
type
sequence G
description BINDING SITE FOR RESIDUE CA B 1444
source : AC9

41) chain B
residue 185
type
sequence D
description BINDING SITE FOR RESIDUE CA B 1444
source : AC9

42) chain B
residue 187
type
sequence L
description BINDING SITE FOR RESIDUE CA B 1444
source : AC9

43) chain B
residue 205
type
sequence D
description BINDING SITE FOR RESIDUE CA B 1444
source : AC9

44) chain B
residue 208
type
sequence E
description BINDING SITE FOR RESIDUE CA B 1444
source : AC9

45) chain B
residue 165
type
sequence D
description BINDING SITE FOR RESIDUE CA B 1445
source : BC1

46) chain B
residue 197
type
sequence G
description BINDING SITE FOR RESIDUE CA B 1445
source : BC1

47) chain B
residue 199
type
sequence Q
description BINDING SITE FOR RESIDUE CA B 1445
source : BC1

48) chain B
residue 201
type
sequence D
description BINDING SITE FOR RESIDUE CA B 1445
source : BC1

49) chain B
residue 131
type
sequence D
description BINDING SITE FOR RESIDUE CA B 1446
source : BC2

50) chain B
residue 206
type
sequence D
description BINDING SITE FOR RESIDUE CA B 1446
source : BC2

51) chain B
residue 208
type
sequence E
description BINDING SITE FOR RESIDUE CA B 1446
source : BC2

52) chain B
residue 211
type
sequence S
description BINDING SITE FOR RESIDUE CA B 1447
source : BC3

53) chain B
residue 212
type
sequence L
description BINDING SITE FOR RESIDUE CA B 1447
source : BC3

54) chain B
residue 213
type
sequence G
description BINDING SITE FOR RESIDUE CA B 1447
source : BC3

55) chain B
residue 214
type
sequence K
description BINDING SITE FOR RESIDUE CA B 1447
source : BC3

56) chain B
residue 391
type
sequence Q
description BINDING SITE FOR RESIDUE CA B 1447
source : BC3

57) chain B
residue 149
type
sequence S
description BINDING SITE FOR RESIDUE CA B 1448
source : BC4

58) chain B
residue 152
type
sequence T
description BINDING SITE FOR RESIDUE CA B 1448
source : BC4

59) chain B
residue 186
type
sequence G
description BINDING SITE FOR RESIDUE NFH B 1449
source : BC5

60) chain B
residue 187
type
sequence L
description BINDING SITE FOR RESIDUE NFH B 1449
source : BC5

61) chain B
residue 188
type
sequence L
description BINDING SITE FOR RESIDUE NFH B 1449
source : BC5

62) chain B
residue 189
type
sequence A
description BINDING SITE FOR RESIDUE NFH B 1449
source : BC5

63) chain B
residue 393
type
sequence Y
description BINDING SITE FOR RESIDUE NFH B 1449
source : BC5

64) chain B
residue 401
type
sequence H
description BINDING SITE FOR RESIDUE NFH B 1449
source : BC5

65) chain B
residue 402
type
sequence E
description BINDING SITE FOR RESIDUE NFH B 1449
source : BC5

66) chain B
residue 405
type
sequence H
description BINDING SITE FOR RESIDUE NFH B 1449
source : BC5

67) chain B
residue 411
type
sequence H
description BINDING SITE FOR RESIDUE NFH B 1449
source : BC5

68) chain B
residue 420
type
sequence Y
description BINDING SITE FOR RESIDUE NFH B 1449
source : BC5

69) chain B
residue 421
type
sequence P
description BINDING SITE FOR RESIDUE NFH B 1449
source : BC5

70) chain B
residue 422
type
sequence M
description BINDING SITE FOR RESIDUE NFH B 1449
source : BC5

71) chain B
residue 423
type
sequence Y
description BINDING SITE FOR RESIDUE NFH B 1449
source : BC5

72) chain B
residue 401
type
sequence H
description BINDING SITE FOR RESIDUE ZN B 1451
source : BC6

73) chain B
residue 405
type
sequence H
description BINDING SITE FOR RESIDUE ZN B 1451
source : BC6

74) chain B
residue 411
type
sequence H
description BINDING SITE FOR RESIDUE ZN B 1451
source : BC6

75) chain B
residue 175
type
sequence H
description BINDING SITE FOR RESIDUE ZN B 1452
source : BC7

76) chain B
residue 177
type
sequence D
description BINDING SITE FOR RESIDUE ZN B 1452
source : BC7

77) chain B
residue 190
type
sequence H
description BINDING SITE FOR RESIDUE ZN B 1452
source : BC7

78) chain B
residue 203
type
sequence H
description BINDING SITE FOR RESIDUE ZN B 1452
source : BC7

79) chain A
residue 398-407
type prosite
sequence VAAHEFGHAL
description ZINC_PROTEASE Neutral zinc metallopeptidases, zinc-binding region signature. VAAHEFGHAL
source prosite : PS00142

80) chain A
residue 402
type ACT_SITE
sequence E
description ACT_SITE => ECO:0000269|PubMed:12051944
source Swiss-Prot : SWS_FT_FI1

81) chain B
residue 402
type ACT_SITE
sequence E
description ACT_SITE => ECO:0000269|PubMed:12051944
source Swiss-Prot : SWS_FT_FI1

82) chain A
residue 131
type BINDING
sequence D
description BINDING => ECO:0000269|PubMed:12051944
source Swiss-Prot : SWS_FT_FI2

83) chain A
residue 205
type BINDING
sequence D
description BINDING => ECO:0000269|PubMed:12051944
source Swiss-Prot : SWS_FT_FI2

84) chain A
residue 206
type BINDING
sequence D
description BINDING => ECO:0000269|PubMed:12051944
source Swiss-Prot : SWS_FT_FI2

85) chain A
residue 208
type BINDING
sequence E
description BINDING => ECO:0000269|PubMed:12051944
source Swiss-Prot : SWS_FT_FI2

86) chain B
residue 131
type BINDING
sequence D
description BINDING => ECO:0000269|PubMed:12051944
source Swiss-Prot : SWS_FT_FI2

87) chain B
residue 165
type BINDING
sequence D
description BINDING => ECO:0000269|PubMed:12051944
source Swiss-Prot : SWS_FT_FI2

88) chain B
residue 182
type BINDING
sequence D
description BINDING => ECO:0000269|PubMed:12051944
source Swiss-Prot : SWS_FT_FI2

89) chain B
residue 183
type BINDING
sequence G
description BINDING => ECO:0000269|PubMed:12051944
source Swiss-Prot : SWS_FT_FI2

90) chain B
residue 185
type BINDING
sequence D
description BINDING => ECO:0000269|PubMed:12051944
source Swiss-Prot : SWS_FT_FI2

91) chain B
residue 187
type BINDING
sequence L
description BINDING => ECO:0000269|PubMed:12051944
source Swiss-Prot : SWS_FT_FI2

92) chain B
residue 197
type BINDING
sequence G
description BINDING => ECO:0000269|PubMed:12051944
source Swiss-Prot : SWS_FT_FI2

93) chain A
residue 165
type BINDING
sequence D
description BINDING => ECO:0000269|PubMed:12051944
source Swiss-Prot : SWS_FT_FI2

94) chain B
residue 199
type BINDING
sequence Q
description BINDING => ECO:0000269|PubMed:12051944
source Swiss-Prot : SWS_FT_FI2

95) chain B
residue 201
type BINDING
sequence D
description BINDING => ECO:0000269|PubMed:12051944
source Swiss-Prot : SWS_FT_FI2

96) chain B
residue 205
type BINDING
sequence D
description BINDING => ECO:0000269|PubMed:12051944
source Swiss-Prot : SWS_FT_FI2

97) chain B
residue 206
type BINDING
sequence D
description BINDING => ECO:0000269|PubMed:12051944
source Swiss-Prot : SWS_FT_FI2

98) chain B
residue 208
type BINDING
sequence E
description BINDING => ECO:0000269|PubMed:12051944
source Swiss-Prot : SWS_FT_FI2

99) chain A
residue 182
type BINDING
sequence D
description BINDING => ECO:0000269|PubMed:12051944
source Swiss-Prot : SWS_FT_FI2

100) chain A
residue 183
type BINDING
sequence G
description BINDING => ECO:0000269|PubMed:12051944
source Swiss-Prot : SWS_FT_FI2

101) chain A
residue 185
type BINDING
sequence D
description BINDING => ECO:0000269|PubMed:12051944
source Swiss-Prot : SWS_FT_FI2

102) chain A
residue 187
type BINDING
sequence L
description BINDING => ECO:0000269|PubMed:12051944
source Swiss-Prot : SWS_FT_FI2

103) chain A
residue 197
type BINDING
sequence G
description BINDING => ECO:0000269|PubMed:12051944
source Swiss-Prot : SWS_FT_FI2

104) chain A
residue 199
type BINDING
sequence Q
description BINDING => ECO:0000269|PubMed:12051944
source Swiss-Prot : SWS_FT_FI2

105) chain A
residue 201
type BINDING
sequence D
description BINDING => ECO:0000269|PubMed:12051944
source Swiss-Prot : SWS_FT_FI2

106) chain A
residue 175
type BINDING
sequence H
description BINDING => ECO:0000269|PubMed:12051944, ECO:0000269|PubMed:12077439
source Swiss-Prot : SWS_FT_FI3

107) chain B
residue 190
type BINDING
sequence H
description BINDING => ECO:0000269|PubMed:12051944, ECO:0000269|PubMed:12077439
source Swiss-Prot : SWS_FT_FI3

108) chain B
residue 203
type BINDING
sequence H
description BINDING => ECO:0000269|PubMed:12051944, ECO:0000269|PubMed:12077439
source Swiss-Prot : SWS_FT_FI3

109) chain B
residue 401
type BINDING
sequence H
description BINDING => ECO:0000269|PubMed:12051944, ECO:0000269|PubMed:12077439
source Swiss-Prot : SWS_FT_FI3

110) chain B
residue 405
type BINDING
sequence H
description BINDING => ECO:0000269|PubMed:12051944, ECO:0000269|PubMed:12077439
source Swiss-Prot : SWS_FT_FI3

111) chain B
residue 411
type BINDING
sequence H
description BINDING => ECO:0000269|PubMed:12051944, ECO:0000269|PubMed:12077439
source Swiss-Prot : SWS_FT_FI3

112) chain A
residue 177
type BINDING
sequence D
description BINDING => ECO:0000269|PubMed:12051944, ECO:0000269|PubMed:12077439
source Swiss-Prot : SWS_FT_FI3

113) chain A
residue 190
type BINDING
sequence H
description BINDING => ECO:0000269|PubMed:12051944, ECO:0000269|PubMed:12077439
source Swiss-Prot : SWS_FT_FI3

114) chain A
residue 203
type BINDING
sequence H
description BINDING => ECO:0000269|PubMed:12051944, ECO:0000269|PubMed:12077439
source Swiss-Prot : SWS_FT_FI3

115) chain A
residue 401
type BINDING
sequence H
description BINDING => ECO:0000269|PubMed:12051944, ECO:0000269|PubMed:12077439
source Swiss-Prot : SWS_FT_FI3

116) chain A
residue 405
type BINDING
sequence H
description BINDING => ECO:0000269|PubMed:12051944, ECO:0000269|PubMed:12077439
source Swiss-Prot : SWS_FT_FI3

117) chain A
residue 411
type BINDING
sequence H
description BINDING => ECO:0000269|PubMed:12051944, ECO:0000269|PubMed:12077439
source Swiss-Prot : SWS_FT_FI3

118) chain B
residue 175
type BINDING
sequence H
description BINDING => ECO:0000269|PubMed:12051944, ECO:0000269|PubMed:12077439
source Swiss-Prot : SWS_FT_FI3

119) chain B
residue 177
type BINDING
sequence D
description BINDING => ECO:0000269|PubMed:12051944, ECO:0000269|PubMed:12077439
source Swiss-Prot : SWS_FT_FI3

120) chain A
residue 120
type CARBOHYD
sequence N
description N-linked (GlcNAc...) asparagine => ECO:0000255
source Swiss-Prot : SWS_FT_FI4

121) chain A
residue 127
type CARBOHYD
sequence N
description N-linked (GlcNAc...) asparagine => ECO:0000255
source Swiss-Prot : SWS_FT_FI4

122) chain B
residue 120
type CARBOHYD
sequence N
description N-linked (GlcNAc...) asparagine => ECO:0000255
source Swiss-Prot : SWS_FT_FI4

123) chain B
residue 127
type CARBOHYD
sequence N
description N-linked (GlcNAc...) asparagine => ECO:0000255
source Swiss-Prot : SWS_FT_FI4


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