eF-site ID 1gfp-A PDB Code 1gfp Chain A click to enlarge Title OMPF PORIN (MUTANT R42C) Classification TRANSMEMBRANE PROTEIN Compound MATRIX PORIN OUTER MEMBRANE PROTEIN F Source Escherichia coli (strain K12) (OMPF_ECOLI) Sequence A:  AEIYNKDGNKVDLYGKAVGLHYFSKGNGENSYGGNGDMTY ACLGFKGETQINSDLTGYGQWEYNFQGNNSEGADAQTGNK TRLAFAGLKYADVGSFDYGRNYGVVYDALGYTDMLPEFGG DTAYSDDFFVGRVGGVATYRNSNFFGLVDGLNFAVQYLGK NERDTARRSNGDGVGGSISYEYEGFGIVGAYGAADRTNLQ EAQPLGNGKKAEQWATGLKYDANNIYLAANYGETRNATPI TNKFTNTSGFANKTQDVLLVAQYQFDFGLRPSIAYTKSKA KDVEGIGDVDLVNYFEVGATYYFNKNMSTYVDYIINQIDS DNKLGVGSDDTVAVGIVYQF Description Functional site 1) chain A residue 157 type sequence Y description BINDING SITE FOR RESIDUE C8E A 341 source : AC1 2) chain A residue 158 type sequence L description BINDING SITE FOR RESIDUE C8E A 341 source : AC1 3) chain A residue 173 type sequence G description BINDING SITE FOR RESIDUE C8E A 341 source : AC1 4) chain A residue 334 type sequence V description BINDING SITE FOR RESIDUE C8E A 342 source : AC2 5) chain A residue 267 type sequence F description BINDING SITE FOR RESIDUE C8E A 344 source : AC3 6) chain A residue 313 type sequence Y description BINDING SITE FOR RESIDUE C8E A 344 source : AC3 7) chain A residue 332 type sequence V description BINDING SITE FOR RESIDUE C8E A 344 source : AC3 8) chain A residue 90 type sequence Y description BINDING SITE FOR RESIDUE C8E A 345 source : AC4 9) chain A residue 147 type sequence L description BINDING SITE FOR RESIDUE C8E A 346 source : AC5 10) chain A residue 148 type sequence V description BINDING SITE FOR RESIDUE C8E A 346 source : AC5 11) chain A residue 178 type sequence I description BINDING SITE FOR RESIDUE C8E A 346 source : AC5 12) chain A residue 187 type sequence I description BINDING SITE FOR RESIDUE C8E A 347 source : AC6 13) chain A residue 263 type sequence Y description BINDING SITE FOR RESIDUE C8E A 350 source : AC8 14) chain A residue 273 type sequence I description BINDING SITE FOR RESIDUE C8E A 353 source : AC9 15) chain A residue 297 type sequence V description BINDING SITE FOR RESIDUE C8E A 354 source : BC1 16) chain A residue 295-311 type prosite sequence FEVGATYYFNKNMSTYV description GRAM_NEG_PORIN General diffusion Gram-negative porins signature. FevGatYyFnKnmSTYV source prosite : PS00576 17) chain A residue 1-6 type TRANSMEM sequence AEIYNK description Beta stranded source Swiss-Prot : SWS_FT_FI1 18) chain A residue 184-195 type TRANSMEM sequence GFGIVGAYGAAD description Beta stranded source Swiss-Prot : SWS_FT_FI1 19) chain A residue 211-222 type TRANSMEM sequence AEQWATGLKYDA description Beta stranded source Swiss-Prot : SWS_FT_FI1 20) chain A residue 224-235 type TRANSMEM sequence NIYLAANYGETR description Beta stranded source Swiss-Prot : SWS_FT_FI1 21) chain A residue 253-265 type TRANSMEM sequence KTQDVLLVAQYQF description Beta stranded source Swiss-Prot : SWS_FT_FI1 22) chain A residue 268-281 type TRANSMEM sequence GLRPSIAYTKSKAK description Beta stranded source Swiss-Prot : SWS_FT_FI1 23) chain A residue 292-303 type TRANSMEM sequence VNYFEVGATYYF description Beta stranded source Swiss-Prot : SWS_FT_FI1 24) chain A residue 306-315 type TRANSMEM sequence NMSTYVDYII description Beta stranded source Swiss-Prot : SWS_FT_FI1 25) chain A residue 331-340 type TRANSMEM sequence TVAVGIVYQF description Beta stranded source Swiss-Prot : SWS_FT_FI1 26) chain A residue 8-23 type TRANSMEM sequence GNKVDLYGKAVGLHYF description Beta stranded source Swiss-Prot : SWS_FT_FI1 27) chain A residue 39-51 type TRANSMEM sequence TYACLGFKGETQI description Beta stranded source Swiss-Prot : SWS_FT_FI1 28) chain A residue 54-66 type TRANSMEM sequence DLTGYGQWEYNFQ description Beta stranded source Swiss-Prot : SWS_FT_FI1 29) chain A residue 83-91 type TRANSMEM sequence LAFAGLKYA description Beta stranded source Swiss-Prot : SWS_FT_FI1 30) chain A residue 94-100 type TRANSMEM sequence GSFDYGR description Beta stranded source Swiss-Prot : SWS_FT_FI1 31) chain A residue 135-141 type TRANSMEM sequence GVATYRN description Beta stranded source Swiss-Prot : SWS_FT_FI1 32) chain A residue 150-159 type TRANSMEM sequence GLNFAVQYLG description Beta stranded source Swiss-Prot : SWS_FT_FI1 33) chain A residue 172-182 type TRANSMEM sequence DGVGGSISYEY description Beta stranded source Swiss-Prot : SWS_FT_FI1 34) chain A residue 7 type TOPO_DOM sequence D description Periplasmic source Swiss-Prot : SWS_FT_FI2 35) chain A residue 52-53 type TOPO_DOM sequence NS description Periplasmic source Swiss-Prot : SWS_FT_FI2 36) chain A residue 92-93 type TOPO_DOM sequence DV description Periplasmic source Swiss-Prot : SWS_FT_FI2 37) chain A residue 142-149 type TOPO_DOM sequence SNFFGLVD description Periplasmic source Swiss-Prot : SWS_FT_FI2 38) chain A residue 183 type TOPO_DOM sequence E description Periplasmic source Swiss-Prot : SWS_FT_FI2 39) chain A residue 223 type TOPO_DOM sequence N description Periplasmic source Swiss-Prot : SWS_FT_FI2 40) chain A residue 266-267 type TOPO_DOM sequence DF description Periplasmic source Swiss-Prot : SWS_FT_FI2 41) chain A residue 304-305 type TOPO_DOM sequence NK description Periplasmic source Swiss-Prot : SWS_FT_FI2 42) chain A residue 24-38 type TOPO_DOM sequence SKGNGENSYGGNGDM description Extracellular source Swiss-Prot : SWS_FT_FI3 43) chain A residue 67-82 type TOPO_DOM sequence GNNSEGADAQTGNKTR description Extracellular source Swiss-Prot : SWS_FT_FI3 44) chain A residue 101-134 type TOPO_DOM sequence NYGVVYDALGYTDMLPEFGGDTAYSDDFFVGRVG description Extracellular source Swiss-Prot : SWS_FT_FI3 45) chain A residue 160-171 type TOPO_DOM sequence KNERDTARRSNG description Extracellular source Swiss-Prot : SWS_FT_FI3 46) chain A residue 196-210 type TOPO_DOM sequence RTNLQEAQPLGNGKK description Extracellular source Swiss-Prot : SWS_FT_FI3 47) chain A residue 236-252 type TOPO_DOM sequence NATPITNKFTNTSGFAN description Extracellular source Swiss-Prot : SWS_FT_FI3 48) chain A residue 282-291 type TOPO_DOM sequence DVEGIGDVDL description Extracellular source Swiss-Prot : SWS_FT_FI3 49) chain A residue 316-330 type TOPO_DOM sequence NQIDSDNKLGVGSDD description Extracellular source Swiss-Prot : SWS_FT_FI3

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