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eF-site ID
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1gdt-B |
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PDB Code
|
1gdt |
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Chain
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B |
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click to enlarge
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Title
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CRYSTAL STRUCTURE OF A SITE-SPECIFIC RECOMBINASE, GAMMA-DELTA RESOLVASE COMPLEXED WITH A 34 BP CLEAVAGE SITE |
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Classification
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DNA BINDING PROTEIN/DNA |
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Compound
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SITE I OF RES DNA |
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Source
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Escherichia coli (strain K12) (1GDT) |
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Sequence
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B: |
MRLFGYARVSTSQQSLDIQVRALKDAGVKANRIFTDKASG
SSSDRKGLDLLRMKVEEGDVILVKKLDRLGRDTADMIQLI
KEFDAQGVSIRFIDDGISTDGEMGKMVVTILSAVAQAERQ
RILERTNEGRQEAMAKGVVFGRKRKIDRDAVLNMWQQGLG
ASHISKTMNIARSTVYKVINESN
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Description
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Functional site
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|
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1)
|
chain |
B |
| residue |
161-180 |
| type |
DNA_BIND |
| sequence |
ASHISKTMNIARSTVYKVIN
|
| description |
H-T-H motif => ECO:0000255
|
| source |
Swiss-Prot : SWS_FT_FI1
|
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2)
|
chain |
B |
| residue |
10 |
| type |
ACT_SITE |
| sequence |
S
|
| description |
O-(5'-phospho-DNA)-serine intermediate => ECO:0000255|PROSITE-ProRule:PRU01072, ECO:0000269|PubMed:6099239
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| source |
Swiss-Prot : SWS_FT_FI2
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