eF-site ID 1g16-ABCD PDB Code 1g16 Chain A, B, C, D click to enlarge Title CRYSTAL STRUCTURE OF SEC4-GDP Classification SIGNALING PROTEIN,ENDOCYTOSIS/EXOCYTOSIS Compound RAS-RELATED PROTEIN SEC4 Source Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) (SEC4_YEAST) Sequence A:  SIXKILLIGDSGVGKSCLLVRFVEDKFNPIDFKIKTVDIN GKKVKLQIWDTAGQERFRTITTAYYRGAXGIILVYDITDE RTFTNIKQWFKTVNEHANDEAQLLLVGNKSDXETRVVTAD QGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEKI B:  SIXKILLIGDSGVGKSCLLVRFVEDKFNPIDFKIKTVDIN GKKVKLQIWDTAGQERFRTITTAYYRGAXGIILVYDITDE RTFTNIKQWFKTVNEHANDEAQLLLVGNKSDXETRVVTAD QGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEKID S C:  SIXKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFK IKTVDINGKKVKLQIWDTAGQERFRTITTAYYRGAXGIIL VYDITDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSDXE TRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAK LIQEKID D:  IXKILLIGDSGVGKSCLLVRFVEDKFNPIDFKIKTVDING KKVKLQIWDTAGQERFRTITTAYYRGAXGIILVYDITDER TFTNIKQWFKTVNEHANDEAQLLLVGNKSDXETRVVTADQ GEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEKIDS Description (1)  RAS-RELATED PROTEIN SEC4 Functional site 1) chain A residue 34 type sequence S description BINDING SITE FOR RESIDUE CO A 301 source : AC1 2) chain C residue 34 type sequence S description BINDING SITE FOR RESIDUE CO C 302 source : AC2 3) chain D residue 34 type sequence S description BINDING SITE FOR RESIDUE CO D 303 source : AC3 4) chain B residue 34 type sequence S description BINDING SITE FOR RESIDUE CO B 304 source : AC4 5) chain A residue 43 type sequence D description BINDING SITE FOR RESIDUE CO A 305 source : AC5 6) chain A residue 166 type sequence D description BINDING SITE FOR RESIDUE CO A 305 source : AC5 7) chain C residue 121 type sequence H description BINDING SITE FOR RESIDUE CO A 305 source : AC5 8) chain A residue 121 type sequence H description BINDING SITE FOR RESIDUE CO C 306 source : AC6 9) chain C residue 166 type sequence D description BINDING SITE FOR RESIDUE CO C 306 source : AC6 10) chain C residue 170 type sequence N description BINDING SITE FOR RESIDUE CO C 306 source : AC6 11) chain B residue 121 type sequence H description BINDING SITE FOR RESIDUE CO D 307 source : AC7 12) chain D residue 43 type sequence D description BINDING SITE FOR RESIDUE CO D 307 source : AC7 13) chain D residue 166 type sequence D description BINDING SITE FOR RESIDUE CO D 307 source : AC7 14) chain B residue 43 type sequence D description BINDING SITE FOR RESIDUE CO D 308 source : AC8 15) chain B residue 166 type sequence D description BINDING SITE FOR RESIDUE CO D 308 source : AC8 16) chain D residue 121 type sequence H description BINDING SITE FOR RESIDUE CO D 308 source : AC8 17) chain A residue 29 type sequence S description BINDING SITE FOR RESIDUE GDP A 201 source : AC9 18) chain A residue 30 type sequence G description BINDING SITE FOR RESIDUE GDP A 201 source : AC9 19) chain A residue 31 type sequence V description BINDING SITE FOR RESIDUE GDP A 201 source : AC9 20) chain A residue 32 type sequence G description BINDING SITE FOR RESIDUE GDP A 201 source : AC9 21) chain A residue 33 type sequence K description BINDING SITE FOR RESIDUE GDP A 201 source : AC9 22) chain A residue 34 type sequence S description BINDING SITE FOR RESIDUE GDP A 201 source : AC9 23) chain A residue 35 type sequence C description BINDING SITE FOR RESIDUE GDP A 201 source : AC9 24) chain A residue 45 type sequence F description BINDING SITE FOR RESIDUE GDP A 201 source : AC9 25) chain A residue 47 type sequence P description BINDING SITE FOR RESIDUE GDP A 201 source : AC9 26) chain A residue 133 type sequence N description BINDING SITE FOR RESIDUE GDP A 201 source : AC9 27) chain A residue 134 type sequence K description BINDING SITE FOR RESIDUE GDP A 201 source : AC9 28) chain A residue 136 type sequence D description BINDING SITE FOR RESIDUE GDP A 201 source : AC9 29) chain A residue 137 type sequence X description BINDING SITE FOR RESIDUE GDP A 201 source : AC9 30) chain A residue 162 type sequence S description BINDING SITE FOR RESIDUE GDP A 201 source : AC9 31) chain A residue 163 type sequence A description BINDING SITE FOR RESIDUE GDP A 201 source : AC9 32) chain A residue 164 type sequence K description BINDING SITE FOR RESIDUE GDP A 201 source : AC9 33) chain B residue 29 type sequence S description BINDING SITE FOR RESIDUE GDP B 202 source : BC1 34) chain B residue 30 type sequence G description BINDING SITE FOR RESIDUE GDP B 202 source : BC1 35) chain B residue 31 type sequence V description BINDING SITE FOR RESIDUE GDP B 202 source : BC1 36) chain B residue 32 type sequence G description BINDING SITE FOR RESIDUE GDP B 202 source : BC1 37) chain B residue 33 type sequence K description BINDING SITE FOR RESIDUE GDP B 202 source : BC1 38) chain B residue 34 type sequence S description BINDING SITE FOR RESIDUE GDP B 202 source : BC1 39) chain B residue 35 type sequence C description BINDING SITE FOR RESIDUE GDP B 202 source : BC1 40) chain B residue 45 type sequence F description BINDING SITE FOR RESIDUE GDP B 202 source : BC1 41) chain B residue 47 type sequence P description BINDING SITE FOR RESIDUE GDP B 202 source : BC1 42) chain B residue 133 type sequence N description BINDING SITE FOR RESIDUE GDP B 202 source : BC1 43) chain B residue 134 type sequence K description BINDING SITE FOR RESIDUE GDP B 202 source : BC1 44) chain B residue 136 type sequence D description BINDING SITE FOR RESIDUE GDP B 202 source : BC1 45) chain B residue 137 type sequence X description BINDING SITE FOR RESIDUE GDP B 202 source : BC1 46) chain B residue 162 type sequence S description BINDING SITE FOR RESIDUE GDP B 202 source : BC1 47) chain B residue 163 type sequence A description BINDING SITE FOR RESIDUE GDP B 202 source : BC1 48) chain B residue 164 type sequence K description BINDING SITE FOR RESIDUE GDP B 202 source : BC1 49) chain C residue 29 type sequence S description BINDING SITE FOR RESIDUE GDP C 203 source : BC2 50) chain C residue 30 type sequence G description BINDING SITE FOR RESIDUE GDP C 203 source : BC2 51) chain C residue 31 type sequence V description BINDING SITE FOR RESIDUE GDP C 203 source : BC2 52) chain C residue 32 type sequence G description BINDING SITE FOR RESIDUE GDP C 203 source : BC2 53) chain C residue 33 type sequence K description BINDING SITE FOR RESIDUE GDP C 203 source : BC2 54) chain C residue 34 type sequence S description BINDING SITE FOR RESIDUE GDP C 203 source : BC2 55) chain C residue 35 type sequence C description BINDING SITE FOR RESIDUE GDP C 203 source : BC2 56) chain C residue 45 type sequence F description BINDING SITE FOR RESIDUE GDP C 203 source : BC2 57) chain C residue 47 type sequence P description BINDING SITE FOR RESIDUE GDP C 203 source : BC2 58) chain C residue 133 type sequence N description BINDING SITE FOR RESIDUE GDP C 203 source : BC2 59) chain C residue 134 type sequence K description BINDING SITE FOR RESIDUE GDP C 203 source : BC2 60) chain C residue 136 type sequence D description BINDING SITE FOR RESIDUE GDP C 203 source : BC2 61) chain C residue 137 type sequence X description BINDING SITE FOR RESIDUE GDP C 203 source : BC2 62) chain C residue 162 type sequence S description BINDING SITE FOR RESIDUE GDP C 203 source : BC2 63) chain C residue 163 type sequence A description BINDING SITE FOR RESIDUE GDP C 203 source : BC2 64) chain C residue 164 type sequence K description BINDING SITE FOR RESIDUE GDP C 203 source : BC2 65) chain D residue 29 type sequence S description BINDING SITE FOR RESIDUE GDP D 204 source : BC3 66) chain D residue 30 type sequence G description BINDING SITE FOR RESIDUE GDP D 204 source : BC3 67) chain D residue 31 type sequence V description BINDING SITE FOR RESIDUE GDP D 204 source : BC3 68) chain D residue 32 type sequence G description BINDING SITE FOR RESIDUE GDP D 204 source : BC3 69) chain D residue 33 type sequence K description BINDING SITE FOR RESIDUE GDP D 204 source : BC3 70) chain D residue 34 type sequence S description BINDING SITE FOR RESIDUE GDP D 204 source : BC3 71) chain D residue 35 type sequence C description BINDING SITE FOR RESIDUE GDP D 204 source : BC3 72) chain D residue 45 type sequence F description BINDING SITE FOR RESIDUE GDP D 204 source : BC3 73) chain D residue 47 type sequence P description BINDING SITE FOR RESIDUE GDP D 204 source : BC3 74) chain D residue 133 type sequence N description BINDING SITE FOR RESIDUE GDP D 204 source : BC3 75) chain D residue 134 type sequence K description BINDING SITE FOR RESIDUE GDP D 204 source : BC3 76) chain D residue 136 type sequence D description BINDING SITE FOR RESIDUE GDP D 204 source : BC3 77) chain D residue 137 type sequence X description BINDING SITE FOR RESIDUE GDP D 204 source : BC3 78) chain D residue 162 type sequence S description BINDING SITE FOR RESIDUE GDP D 204 source : BC3 79) chain D residue 163 type sequence A description BINDING SITE FOR RESIDUE GDP D 204 source : BC3 80) chain D residue 164 type sequence K description BINDING SITE FOR RESIDUE GDP D 204 source : BC3 81) chain A residue 27 type BINDING sequence G description source Swiss-Prot : SWS_FT_FI1 82) chain A residue 75 type BINDING sequence D description source Swiss-Prot : SWS_FT_FI1 83) chain B residue 27 type BINDING sequence G description source Swiss-Prot : SWS_FT_FI1 84) chain B residue 75 type BINDING sequence D description source Swiss-Prot : SWS_FT_FI1 85) chain C residue 27 type BINDING sequence G description source Swiss-Prot : SWS_FT_FI1 86) chain C residue 75 type BINDING sequence D description source Swiss-Prot : SWS_FT_FI1 87) chain D residue 27 type BINDING sequence G description source Swiss-Prot : SWS_FT_FI1 88) chain D residue 75 type BINDING sequence D description source Swiss-Prot : SWS_FT_FI1 89) chain A residue 133 type BINDING sequence N description BINDING => ECO:0000250 source Swiss-Prot : SWS_FT_FI2 90) chain B residue 133 type BINDING sequence N description BINDING => ECO:0000250 source Swiss-Prot : SWS_FT_FI2 91) chain C residue 133 type BINDING sequence N description BINDING => ECO:0000250 source Swiss-Prot : SWS_FT_FI2 92) chain D residue 133 type BINDING sequence N description BINDING => ECO:0000250 source Swiss-Prot : SWS_FT_FI2 93) chain A residue 23-36 type prosite sequence ILLIGDSGVGKSCL description SIGMA54_INTERACT_1 Sigma-54 interaction domain ATP-binding region A signature. ILLiGDSGVGKscL source prosite : PS00675

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