eF-site ID 1fjg-D
PDB Code 1fjg
Chain D

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Title STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT IN COMPLEX WITH THE ANTIBIOTICS STREPTOMYCIN, SPECTINOMYCIN, AND PAROMOMYCIN
Classification RIBOSOME
Compound 16S RIBOSOMAL RNA
Source ORGANISM_SCIENTIFIC: Thermus thermophilus;
Sequence D:  GRYIGPVCRLCRREGVKLYLKGERCYSPKCAMERRPYPPG
QHGQKRARRPSDYAVRLREKQKLRRIYGISERQFRNLFEE
ASKKKGVTGSVFLGLLESRLDNVVYRLGFAVSRRQARQLV
RHGHITVNGRRVDLPSYRVRPGDEIAVAEKSRNLELIRQN
LEAMKGRKVGPWLSLDVEGMKGKFLRLPDREDLALPVQEN
LVIEFYSR
Description (1)  INHIBITED 30S RIBOSOMAL SUBUNIT


Functional site

1) chain D
residue 82
type
sequence A
description BINDING SITE FOR RESIDUE MG D 215
source : GC6

2) chain D
residue 83
type
sequence S
description BINDING SITE FOR RESIDUE MG D 215
source : GC6

3) chain D
residue 85
type
sequence K
description BINDING SITE FOR RESIDUE MG D 215
source : GC6

4) chain D
residue 87
type
sequence G
description BINDING SITE FOR RESIDUE MG D 215
source : GC6

5) chain D
residue 89
type
sequence T
description BINDING SITE FOR RESIDUE MG D 215
source : GC6

6) chain D
residue 9
type
sequence C
description BINDING SITE FOR RESIDUE ZN D 300
source : JC4

7) chain D
residue 12
type
sequence C
description BINDING SITE FOR RESIDUE ZN D 300
source : JC4

8) chain D
residue 19
type
sequence L
description BINDING SITE FOR RESIDUE ZN D 300
source : JC4

9) chain D
residue 26
type
sequence C
description BINDING SITE FOR RESIDUE ZN D 300
source : JC4

10) chain D
residue 31
type
sequence C
description BINDING SITE FOR RESIDUE ZN D 300
source : JC4

11) chain D
residue 97-121
type prosite
sequence LESRLDNVVYRLGFAVSRRQARQLV
description RIBOSOMAL_S4 Ribosomal protein S4 signature. LEsRLdnvVYRlgfAvSrrqARqLV
source prosite : PS00632


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