eF-site ID 1f66-ABCDEFGH
PDB Code 1f66
Chain A, B, C, D, E, F, G, H

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Title 2.6 A CRYSTAL STRUCTURE OF A NUCLEOSOME CORE PARTICLE CONTAINING THE VARIANT HISTONE H2A.Z
Classification STRUCTURAL PROTEIN/DNA
Compound PALINDROMIC 146 BASE PAIR DNA FRAGMENT
Source Mus musculus (Mouse) (1F66)
Sequence A:  KKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIA
QDFKTDLRFQSSAVMALQEASEAYLVALFEDTNLCAIHAK
RVTIMPKDIQLARRIRGERA
B:  RDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFL
ENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG
C:  AVSRSQRAGLQFPVGRIHRHLKSRTTSHGRVGATAAVYSA
AILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEE
LDSLIKATIAGGGVIPHIHKSLI
D:  KTRKESYAIYVYKVLKQVHPDTGISSKAMSIMNSFVNDVF
ERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHA
VSEGTKAVTKYTSAK
E:  GEVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVR
EIAQDFKTDLRFQSSAVMALQEASEAYLVALFEDTNLCAI
HAKRVTIMPKDIQLARRIRGERA
F:  RHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRG
VLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRT
LYGFGG
G:  AVSRSQRAGLQFPVGRIHRHLKSRTTSHGRVGATAAVYSA
AILEYLTAEVLELAGNASKDLKVKRITPRHLQLAIRGDEE
LDSLIKATIAGGGVIPHIHKSLIGKKG
H:  KTRKESYAIYVYKVLKQVHPDTGISSKAMSIMNSFVNDVF
ERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHA
VSEGTKAVTKYTSAK
Description


Functional site

1) chain D
residue 1245
type
sequence V
description BINDING SITE FOR RESIDUE MN E 1001
source : AC1

2) chain E
residue 677
type
sequence D
description BINDING SITE FOR RESIDUE MN E 1001
source : AC1

3) chain C
residue 912
type
sequence H
description BINDING SITE FOR RESIDUE MN C 1014
source : BC4

4) chain C
residue 914
type
sequence H
description BINDING SITE FOR RESIDUE MN C 1014
source : BC4

5) chain G
residue 1112
type
sequence H
description BINDING SITE FOR RESIDUE MN G 1128
source : BC5

6) chain G
residue 1114
type
sequence H
description BINDING SITE FOR RESIDUE MN G 1128
source : BC5

7) chain C
residue 823-829
type prosite
sequence AGLQFPV
description HISTONE_H2A Histone H2A signature. AGLqFPV
source prosite : PS00046

8) chain D
residue 1289-1311
type prosite
sequence REIQTAVRLLLPGELAKHAVSEG
description HISTONE_H2B Histone H2B signature. REIQTavRlLLpGELaKHAVSEG
source prosite : PS00357

9) chain A
residue 466-474
type prosite
sequence PFQRLVREI
description HISTONE_H3_2 Histone H3 signature 2. PFqRLVREI
source prosite : PS00959

10) chain E
residue 664
type MOD_RES
sequence K
description N6-methyllysine; alternate => ECO:0000250|UniProtKB:Q71DI3
source Swiss-Prot : SWS_FT_FI10

11) chain A
residue 436
type MOD_RES
sequence K
description N6-methyllysine; alternate => ECO:0000250|UniProtKB:Q71DI3
source Swiss-Prot : SWS_FT_FI10

12) chain A
residue 464
type MOD_RES
sequence K
description N6-methyllysine; alternate => ECO:0000250|UniProtKB:Q71DI3
source Swiss-Prot : SWS_FT_FI10

13) chain E
residue 636
type MOD_RES
sequence K
description N6-methyllysine; alternate => ECO:0000250|UniProtKB:Q71DI3
source Swiss-Prot : SWS_FT_FI10

14) chain A
residue 437
type MOD_RES
sequence K
description N6-methyllysine => ECO:0000250|UniProtKB:P68431
source Swiss-Prot : SWS_FT_FI13

15) chain E
residue 637
type MOD_RES
sequence K
description N6-methyllysine => ECO:0000250|UniProtKB:P68431
source Swiss-Prot : SWS_FT_FI13

16) chain A
residue 441
type MOD_RES
sequence Y
description Phosphotyrosine => ECO:0000250|UniProtKB:Q71DI3
source Swiss-Prot : SWS_FT_FI14

17) chain E
residue 641
type MOD_RES
sequence Y
description Phosphotyrosine => ECO:0000250|UniProtKB:Q71DI3
source Swiss-Prot : SWS_FT_FI14

18) chain A
residue 456
type MOD_RES
sequence K
description N6-succinyllysine; alternate => ECO:0000250|UniProtKB:P84228
source Swiss-Prot : SWS_FT_FI15

19) chain A
residue 479
type MOD_RES
sequence K
description N6-succinyllysine; alternate => ECO:0000250|UniProtKB:P84228
source Swiss-Prot : SWS_FT_FI15

20) chain E
residue 656
type MOD_RES
sequence K
description N6-succinyllysine; alternate => ECO:0000250|UniProtKB:P84228
source Swiss-Prot : SWS_FT_FI15

21) chain E
residue 679
type MOD_RES
sequence K
description N6-succinyllysine; alternate => ECO:0000250|UniProtKB:P84228
source Swiss-Prot : SWS_FT_FI15

22) chain F
residue 220
type MOD_RES
sequence K
description N6-succinyllysine; alternate => ECO:0000250|UniProtKB:P84228
source Swiss-Prot : SWS_FT_FI15

23) chain F
residue 259
type MOD_RES
sequence K
description N6-succinyllysine; alternate => ECO:0000250|UniProtKB:P84228
source Swiss-Prot : SWS_FT_FI15

24) chain F
residue 279
type MOD_RES
sequence K
description N6-succinyllysine; alternate => ECO:0000250|UniProtKB:P84228
source Swiss-Prot : SWS_FT_FI15

25) chain A
residue 457
type MOD_RES
sequence S
description Phosphoserine => ECO:0000250|UniProtKB:Q71DI3
source Swiss-Prot : SWS_FT_FI16

26) chain E
residue 657
type MOD_RES
sequence S
description Phosphoserine => ECO:0000250|UniProtKB:Q71DI3
source Swiss-Prot : SWS_FT_FI16

27) chain F
residue 291
type MOD_RES
sequence K
description Phosphoserine => ECO:0000250|UniProtKB:Q71DI3
source Swiss-Prot : SWS_FT_FI16

28) chain A
residue 480
type MOD_RES
sequence T
description Phosphothreonine => ECO:0000250|UniProtKB:Q71DI3
source Swiss-Prot : SWS_FT_FI17

29) chain A
residue 507
type MOD_RES
sequence T
description Phosphothreonine => ECO:0000250|UniProtKB:Q71DI3
source Swiss-Prot : SWS_FT_FI17

30) chain E
residue 680
type MOD_RES
sequence T
description Phosphothreonine => ECO:0000250|UniProtKB:Q71DI3
source Swiss-Prot : SWS_FT_FI17

31) chain E
residue 707
type MOD_RES
sequence T
description Phosphothreonine => ECO:0000250|UniProtKB:Q71DI3
source Swiss-Prot : SWS_FT_FI17

32) chain A
residue 486
type MOD_RES
sequence S
description Phosphoserine => ECO:0000250|UniProtKB:P84243
source Swiss-Prot : SWS_FT_FI18

33) chain E
residue 686
type MOD_RES
sequence S
description Phosphoserine => ECO:0000250|UniProtKB:P84243
source Swiss-Prot : SWS_FT_FI18

34) chain A
residue 515
type MOD_RES
sequence K
description N6-glutaryllysine; alternate => ECO:0000250|UniProtKB:Q71DI3
source Swiss-Prot : SWS_FT_FI19

35) chain E
residue 715
type MOD_RES
sequence K
description N6-glutaryllysine; alternate => ECO:0000250|UniProtKB:Q71DI3
source Swiss-Prot : SWS_FT_FI19

36) chain A
residue 522
type MOD_RES
sequence K
description N6-succinyllysine; alternate => ECO:0000250|UniProtKB:Q71DI3
source Swiss-Prot : SWS_FT_FI20

37) chain E
residue 722
type MOD_RES
sequence K
description N6-succinyllysine; alternate => ECO:0000250|UniProtKB:Q71DI3
source Swiss-Prot : SWS_FT_FI20

38) chain A
residue 510
type LIPID
sequence C
description S-palmitoyl cysteine => ECO:0000250|UniProtKB:Q71DI3
source Swiss-Prot : SWS_FT_FI21

39) chain E
residue 710
type LIPID
sequence C
description S-palmitoyl cysteine => ECO:0000250|UniProtKB:Q71DI3
source Swiss-Prot : SWS_FT_FI21

40) chain H
residue 1518
type MOD_RES
sequence Y
description 5-glutamyl serotonin; alternate => ECO:0000250|UniProtKB:Q71DI3
source Swiss-Prot : SWS_FT_FI4

41) chain F
residue 244
type MOD_RES
sequence K
description Phosphothreonine; by PKC => ECO:0000250|UniProtKB:Q71DI3
source Swiss-Prot : SWS_FT_FI5

42) chain B
residue 79
type MOD_RES
sequence K
description Phosphoserine; alternate; by AURKB, AURKC, RPS6KA3, RPS6KA4 and RPS6KA5 => ECO:0000250|UniProtKB:Q71DI3
source Swiss-Prot : SWS_FT_FI8

43) chain F
residue 231
type MOD_RES
sequence K
description Phosphoserine; alternate; by AURKB, AURKC, RPS6KA3, RPS6KA4 and RPS6KA5 => ECO:0000250|UniProtKB:Q71DI3
source Swiss-Prot : SWS_FT_FI8

44) chain F
residue 277
type MOD_RES
sequence K
description Phosphoserine; alternate; by AURKB, AURKC, RPS6KA3, RPS6KA4 and RPS6KA5 => ECO:0000250|UniProtKB:Q71DI3
source Swiss-Prot : SWS_FT_FI8

45) chain F
residue 279
type MOD_RES
sequence K
description Phosphoserine; alternate; by AURKB, AURKC, RPS6KA3, RPS6KA4 and RPS6KA5 => ECO:0000250|UniProtKB:Q71DI3
source Swiss-Prot : SWS_FT_FI8


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