eF-site ID 1f3f-ABC
PDB Code 1f3f
Chain A, B, C

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Title STRUCTURE OF THE H122G NUCLEOSIDE DIPHOSPHATE KINASE / D4T-TRIPHOSPHATE.MG COMPLEX
Classification TRANSFERASE
Compound PROTEIN (NUCLEOSIDE DIPHOSPHATE KINASE)
Source Dictyostelium discoideum (Slime mold) (NDKC_DICDI)
Sequence A:  VNKERTFLAVKPDGVARGLVGEIIARYEKKGFVLVGLKQL
VPTKDLAESHYAEHKERPFFGGLVSFITSGPVVAMVFEGK
GVVASARLMIGVTNPLASAPGSIRGDFGVDVGRNIIGGSD
SVESANREIALWFKPEELLTEVKPNPNLYE
B:  VNKERTFLAVKPDGVARGLVGEIIARYEKKGFVLVGLKQL
VPTKDLAESHYAEHKERPFFGGLVSFITSGPVVAMVFEGK
GVVASARLMIGVTNPLASAPGSIRGDFGVDVGRNIIGGSD
SVESANREIALWFKPEELLTEVKPNPNLYE
C:  VNKERTFLAVKPDGVARGLVGEIIARYEKKGFVLVGLKQL
VPTKDLAESHYAEHKERPFFGGLVSFITSGPVVAMVFEGK
GVVASARLMIGVTNPLASAPGSIRGDFGVDVGRNIIGGSD
SVESANREIALWFKPEELLTEVKPNPNLYE
Description


Functional site

1) chain B
residue 16
type
sequence K
description BINDING SITE FOR RESIDUE PO4 B 162
source : AC1

2) chain B
residue 55
type
sequence H
description BINDING SITE FOR RESIDUE PO4 B 162
source : AC1

3) chain B
residue 56
type
sequence Y
description BINDING SITE FOR RESIDUE PO4 B 162
source : AC1

4) chain B
residue 92
type
sequence R
description BINDING SITE FOR RESIDUE PO4 B 162
source : AC1

5) chain B
residue 122
type
sequence G
description BINDING SITE FOR RESIDUE PO4 B 162
source : AC1

6) chain B
residue 123
type
sequence G
description BINDING SITE FOR RESIDUE PO4 B 162
source : AC1

7) chain A
residue 16
type
sequence K
description BINDING SITE FOR RESIDUE D4T A 160
source : AC5

8) chain A
residue 56
type
sequence Y
description BINDING SITE FOR RESIDUE D4T A 160
source : AC5

9) chain A
residue 59
type
sequence H
description BINDING SITE FOR RESIDUE D4T A 160
source : AC5

10) chain A
residue 64
type
sequence F
description BINDING SITE FOR RESIDUE D4T A 160
source : AC5

11) chain A
residue 68
type
sequence L
description BINDING SITE FOR RESIDUE D4T A 160
source : AC5

12) chain A
residue 92
type
sequence R
description BINDING SITE FOR RESIDUE D4T A 160
source : AC5

13) chain A
residue 98
type
sequence T
description BINDING SITE FOR RESIDUE D4T A 160
source : AC5

14) chain A
residue 109
type
sequence R
description BINDING SITE FOR RESIDUE D4T A 160
source : AC5

15) chain A
residue 116
type
sequence V
description BINDING SITE FOR RESIDUE D4T A 160
source : AC5

16) chain A
residue 117
type
sequence G
description BINDING SITE FOR RESIDUE D4T A 160
source : AC5

17) chain A
residue 119
type
sequence N
description BINDING SITE FOR RESIDUE D4T A 160
source : AC5

18) chain A
residue 122
type
sequence G
description BINDING SITE FOR RESIDUE D4T A 160
source : AC5

19) chain A
residue 123
type
sequence G
description BINDING SITE FOR RESIDUE D4T A 160
source : AC5

20) chain B
residue 16
type
sequence K
description BINDING SITE FOR RESIDUE D4T B 161
source : AC6

21) chain B
residue 56
type
sequence Y
description BINDING SITE FOR RESIDUE D4T B 161
source : AC6

22) chain B
residue 59
type
sequence H
description BINDING SITE FOR RESIDUE D4T B 161
source : AC6

23) chain B
residue 64
type
sequence F
description BINDING SITE FOR RESIDUE D4T B 161
source : AC6

24) chain B
residue 68
type
sequence L
description BINDING SITE FOR RESIDUE D4T B 161
source : AC6

25) chain B
residue 92
type
sequence R
description BINDING SITE FOR RESIDUE D4T B 161
source : AC6

26) chain B
residue 98
type
sequence T
description BINDING SITE FOR RESIDUE D4T B 161
source : AC6

27) chain B
residue 109
type
sequence R
description BINDING SITE FOR RESIDUE D4T B 161
source : AC6

28) chain B
residue 116
type
sequence V
description BINDING SITE FOR RESIDUE D4T B 161
source : AC6

29) chain B
residue 117
type
sequence G
description BINDING SITE FOR RESIDUE D4T B 161
source : AC6

30) chain B
residue 119
type
sequence N
description BINDING SITE FOR RESIDUE D4T B 161
source : AC6

31) chain B
residue 122
type
sequence G
description BINDING SITE FOR RESIDUE D4T B 161
source : AC6

32) chain B
residue 123
type
sequence G
description BINDING SITE FOR RESIDUE D4T B 161
source : AC6

33) chain B
residue 16
type
sequence K
description BINDING SITE FOR RESIDUE D4D B 163
source : AC7

34) chain B
residue 59
type
sequence H
description BINDING SITE FOR RESIDUE D4D B 163
source : AC7

35) chain B
residue 64
type
sequence F
description BINDING SITE FOR RESIDUE D4D B 163
source : AC7

36) chain B
residue 68
type
sequence L
description BINDING SITE FOR RESIDUE D4D B 163
source : AC7

37) chain B
residue 92
type
sequence R
description BINDING SITE FOR RESIDUE D4D B 163
source : AC7

38) chain B
residue 98
type
sequence T
description BINDING SITE FOR RESIDUE D4D B 163
source : AC7

39) chain B
residue 109
type
sequence R
description BINDING SITE FOR RESIDUE D4D B 163
source : AC7

40) chain B
residue 116
type
sequence V
description BINDING SITE FOR RESIDUE D4D B 163
source : AC7

41) chain B
residue 117
type
sequence G
description BINDING SITE FOR RESIDUE D4D B 163
source : AC7

42) chain B
residue 119
type
sequence N
description BINDING SITE FOR RESIDUE D4D B 163
source : AC7

43) chain C
residue 16
type
sequence K
description BINDING SITE FOR RESIDUE D4T C 164
source : AC8

44) chain C
residue 56
type
sequence Y
description BINDING SITE FOR RESIDUE D4T C 164
source : AC8

45) chain C
residue 59
type
sequence H
description BINDING SITE FOR RESIDUE D4T C 164
source : AC8

46) chain C
residue 64
type
sequence F
description BINDING SITE FOR RESIDUE D4T C 164
source : AC8

47) chain C
residue 68
type
sequence L
description BINDING SITE FOR RESIDUE D4T C 164
source : AC8

48) chain C
residue 92
type
sequence R
description BINDING SITE FOR RESIDUE D4T C 164
source : AC8

49) chain C
residue 98
type
sequence T
description BINDING SITE FOR RESIDUE D4T C 164
source : AC8

50) chain C
residue 109
type
sequence R
description BINDING SITE FOR RESIDUE D4T C 164
source : AC8

51) chain C
residue 116
type
sequence V
description BINDING SITE FOR RESIDUE D4T C 164
source : AC8

52) chain C
residue 117
type
sequence G
description BINDING SITE FOR RESIDUE D4T C 164
source : AC8

53) chain C
residue 119
type
sequence N
description BINDING SITE FOR RESIDUE D4T C 164
source : AC8

54) chain C
residue 122
type
sequence G
description BINDING SITE FOR RESIDUE D4T C 164
source : AC8

55) chain C
residue 123
type
sequence G
description BINDING SITE FOR RESIDUE D4T C 164
source : AC8

56) chain A
residue 16
type catalytic
sequence K
description 150
source MCSA : MCSA1

57) chain A
residue 56
type catalytic
sequence Y
description 150
source MCSA : MCSA1

58) chain A
residue 119
type catalytic
sequence N
description 150
source MCSA : MCSA1

59) chain A
residue 122
type catalytic
sequence G
description 150
source MCSA : MCSA1

60) chain A
residue 133
type catalytic
sequence E
description 150
source MCSA : MCSA1

61) chain B
residue 16
type catalytic
sequence K
description 150
source MCSA : MCSA2

62) chain B
residue 56
type catalytic
sequence Y
description 150
source MCSA : MCSA2

63) chain B
residue 119
type catalytic
sequence N
description 150
source MCSA : MCSA2

64) chain B
residue 122
type catalytic
sequence G
description 150
source MCSA : MCSA2

65) chain B
residue 133
type catalytic
sequence E
description 150
source MCSA : MCSA2

66) chain C
residue 16
type catalytic
sequence K
description 150
source MCSA : MCSA3

67) chain C
residue 56
type catalytic
sequence Y
description 150
source MCSA : MCSA3

68) chain C
residue 119
type catalytic
sequence N
description 150
source MCSA : MCSA3

69) chain C
residue 122
type catalytic
sequence G
description 150
source MCSA : MCSA3

70) chain C
residue 133
type catalytic
sequence E
description 150
source MCSA : MCSA3

71) chain A
residue 16
type BINDING
sequence K
description
source Swiss-Prot : SWS_FT_FI2

72) chain B
residue 98
type BINDING
sequence T
description
source Swiss-Prot : SWS_FT_FI2

73) chain B
residue 109
type BINDING
sequence R
description
source Swiss-Prot : SWS_FT_FI2

74) chain B
residue 119
type BINDING
sequence N
description
source Swiss-Prot : SWS_FT_FI2

75) chain C
residue 16
type BINDING
sequence K
description
source Swiss-Prot : SWS_FT_FI2

76) chain C
residue 64
type BINDING
sequence F
description
source Swiss-Prot : SWS_FT_FI2

77) chain C
residue 92
type BINDING
sequence R
description
source Swiss-Prot : SWS_FT_FI2

78) chain C
residue 98
type BINDING
sequence T
description
source Swiss-Prot : SWS_FT_FI2

79) chain C
residue 109
type BINDING
sequence R
description
source Swiss-Prot : SWS_FT_FI2

80) chain C
residue 119
type BINDING
sequence N
description
source Swiss-Prot : SWS_FT_FI2

81) chain A
residue 64
type BINDING
sequence F
description
source Swiss-Prot : SWS_FT_FI2

82) chain A
residue 92
type BINDING
sequence R
description
source Swiss-Prot : SWS_FT_FI2

83) chain A
residue 98
type BINDING
sequence T
description
source Swiss-Prot : SWS_FT_FI2

84) chain A
residue 109
type BINDING
sequence R
description
source Swiss-Prot : SWS_FT_FI2

85) chain A
residue 119
type BINDING
sequence N
description
source Swiss-Prot : SWS_FT_FI2

86) chain B
residue 16
type BINDING
sequence K
description
source Swiss-Prot : SWS_FT_FI2

87) chain B
residue 64
type BINDING
sequence F
description
source Swiss-Prot : SWS_FT_FI2

88) chain B
residue 92
type BINDING
sequence R
description
source Swiss-Prot : SWS_FT_FI2

89) chain A
residue 122
type ACT_SITE
sequence G
description Pros-phosphohistidine intermediate
source Swiss-Prot : SWS_FT_FI1

90) chain B
residue 122
type ACT_SITE
sequence G
description Pros-phosphohistidine intermediate
source Swiss-Prot : SWS_FT_FI1

91) chain C
residue 122
type ACT_SITE
sequence G
description Pros-phosphohistidine intermediate
source Swiss-Prot : SWS_FT_FI1


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