eF-site ID 1eqz-D
PDB Code 1eqz
Chain D

click to enlarge
Title X-RAY STRUCTURE OF THE NUCLEOSOME CORE PARTICLE AT 2.5 A RESOLUTION
Classification STRUCTURAL PROTEIN/DNA
Compound 146 NUCLEOTIDES LONG DNA
Source ORGANISM_COMMON: chicken; ORGANISM_SCIENTIFIC: Gallus gallus;
Sequence D:  GAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEE
TRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQ
GRTLYGFGG
Description


Functional site

1) chain D
residue 16-20
type DNA_BIND
sequence KRHRK
description
source Swiss-Prot : SWS_FT_FI1

2) chain D
residue 59
type MOD_RES
sequence K
description N6-glutaryllysine; alternate => ECO:0000250|UniProtKB:P62805
source Swiss-Prot : SWS_FT_FI10

3) chain D
residue 77
type MOD_RES
sequence K
description N6-succinyllysine => ECO:0000250|UniProtKB:P62805
source Swiss-Prot : SWS_FT_FI11

4) chain D
residue 31
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in UFM1); alternate => ECO:0000250|UniProtKB:P62805
source Swiss-Prot : SWS_FT_FI12

5) chain D
residue 91
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin); alternate => ECO:0000250|UniProtKB:P62805
source Swiss-Prot : SWS_FT_FI13

6) chain D
residue 16
type MOD_RES
sequence K
description N6-propionyllysine; alternate => ECO:0000250|UniProtKB:P62805
source Swiss-Prot : SWS_FT_FI5

7) chain D
residue 44
type MOD_RES
sequence K
description N6-propionyllysine; alternate => ECO:0000250|UniProtKB:P62805
source Swiss-Prot : SWS_FT_FI5

8) chain D
residue 79
type MOD_RES
sequence K
description N6-propionyllysine; alternate => ECO:0000250|UniProtKB:P62805
source Swiss-Prot : SWS_FT_FI5

9) chain D
residue 20
type MOD_RES
sequence K
description N6-methyllysine; alternate => ECO:0000250|UniProtKB:P62805
source Swiss-Prot : SWS_FT_FI6

10) chain D
residue 31
type MOD_RES
sequence K
description N6-succinyllysine; alternate => ECO:0000250|UniProtKB:P62805
source Swiss-Prot : SWS_FT_FI7

11) chain D
residue 91
type MOD_RES
sequence K
description N6-succinyllysine; alternate => ECO:0000250|UniProtKB:P62805
source Swiss-Prot : SWS_FT_FI7

12) chain D
residue 47
type MOD_RES
sequence S
description Phosphoserine; by PAK2 => ECO:0000250|UniProtKB:P62805
source Swiss-Prot : SWS_FT_FI8

13) chain D
residue 51
type MOD_RES
sequence Y
description Phosphotyrosine => ECO:0000250|UniProtKB:P62805
source Swiss-Prot : SWS_FT_FI9

14) chain D
residue 88
type MOD_RES
sequence Y
description Phosphotyrosine => ECO:0000250|UniProtKB:P62805
source Swiss-Prot : SWS_FT_FI9

15) chain D
residue 14-18
type prosite
sequence GAKRH
description HISTONE_H4 Histone H4 signature. GAKRH
source prosite : PS00047


Display surface

Download
Links