eF-site ID 1ef4_10-A
PDB Code 1ef4
Model 10
Chain A

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Title SOLUTION STRUCTURE OF THE ESSENTIAL RNA POLYMERASE SUBUNIT RPB10 FROM METHANOBACTERIUM THERMOAUTOTROPHICUM
Classification TRANSFERASE
Compound DNA-DIRECTED RNA POLYMERASE
Source Methanobacterium thermoautotrophicum (strain Delta H) (RPON_METTH)
Sequence A:  MIPVRCLSCGKPVSAYFNEYQRRVADGEDPKDVLDDLGLK
RYCCRRMLISHVETW
Description


Functional site

1) chain A
residue 6
type
sequence C
description BINDING SITE FOR RESIDUE ZN A 56
source : AC1

2) chain A
residue 9
type
sequence C
description BINDING SITE FOR RESIDUE ZN A 56
source : AC1

3) chain A
residue 43
type
sequence C
description BINDING SITE FOR RESIDUE ZN A 56
source : AC1

4) chain A
residue 44
type
sequence C
description BINDING SITE FOR RESIDUE ZN A 56
source : AC1

5) chain A
residue 6
type BINDING
sequence C
description BINDING => ECO:0000255|HAMAP-Rule:MF_00250, ECO:0000269|PubMed:10841539, ECO:0007744|PDB:1EF4
source Swiss-Prot : SWS_FT_FI1

6) chain A
residue 9
type BINDING
sequence C
description BINDING => ECO:0000255|HAMAP-Rule:MF_00250, ECO:0000269|PubMed:10841539, ECO:0007744|PDB:1EF4
source Swiss-Prot : SWS_FT_FI1

7) chain A
residue 43
type BINDING
sequence C
description BINDING => ECO:0000255|HAMAP-Rule:MF_00250, ECO:0000269|PubMed:10841539, ECO:0007744|PDB:1EF4
source Swiss-Prot : SWS_FT_FI1

8) chain A
residue 44
type BINDING
sequence C
description BINDING => ECO:0000255|HAMAP-Rule:MF_00250, ECO:0000269|PubMed:10841539, ECO:0007744|PDB:1EF4
source Swiss-Prot : SWS_FT_FI1

9) chain A
residue 1-10
type prosite
sequence MIPVRCLSCG
description RNA_POL_N_8KD RNA polymerases N / 8 Kd subunits signature. MIPVrCLSCG
source prosite : PS01112


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