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eF-site ID
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1e6j-HLP |
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PDB Code
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1e6j |
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Chain
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H, L, P |
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click to enlarge
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Title
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Crystal structure of HIV-1 capsid protein (p24) in complex with Fab13B5 |
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Classification
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VIRAL PROTEIN |
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Compound
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IMMUNOGLOBULIN |
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Source
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ORGANISM_COMMON: HOUSE MOUSE; ORGANISM_SCIENTIFIC: MUS MUSCULUS; |
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Sequence
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H: |
EVQLQQSGAELARPGASVKMSCKASGYTFTSYTMHWVKQR
PGQGLEWIGYINPSSGYSNYNQKFKDKATLTADKSSSTAY
MQLSSLTSEDSAVYYCSRPVVRLGYNFDYWGQGSTLTVSS
AKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVT
WNSGSLSSGVHTFPAVLQSDLYTLSSSVTVPSSTWPSETV
TCNVAHPASSTKVDKKIVP
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| L: |
EIVLTQSPAITAASLGQKVTITCSASSSVSYMHWYQQKSG
TSPKPWIYEISKLASGVPARFSGSGSGTSYSLTISSMEAE
DAAIYYCQQWNYPFTFGSGTKLEIKRADAAPTVSIFPPSS
EQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNS
WTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTST
SPIVKSFNRN
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| P: |
VHQAISPRTLNAWVKVVEEKAFSPEVIPMFSALSEGATPQ
DLNTMLNTVGGHQAAMQMLKETINEEAAEWDRVHPVHAGP
IAPGQMREPRGSDIAGTTSTLQEQIGWMTNNPPIPVGEIY
KRWIILGLNKIVRMYSPTSILDIRQGPKEPFRDYVDRFYK
TLRAEQASQEVKNWMTETLLVQNANPDCKTILKALGPAAT
LEEMMTACQG
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Description
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Functional site
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1)
|
chain |
L |
| residue |
190-196 |
| type |
prosite |
| sequence |
YTCEATH
|
| description |
IG_MHC Immunoglobulins and major histocompatibility complex proteins signature. YTCEATH
|
| source |
prosite : PS00290
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2)
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chain |
P |
| residue |
16 |
| type |
MOD_RES |
| sequence |
S
|
| description |
Phosphoserine; by host MAPK1 => ECO:0000250|UniProtKB:P12493
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| source |
Swiss-Prot : SWS_FT_FI1
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