eF-site ID 1dt9-A
PDB Code 1dt9
Chain A

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Title THE CRYSTAL STRUCTURE OF HUMAN EUKARYOTIC RELEASE FACTOR ERF1-MECHANISM OF STOP CODON RECOGNITION AND PEPTIDYL-TRNA HYDROLYSIS
Classification TRANSLATION
Compound PROTEIN (EUKARYOTIC PEPTIDE CHAIN RELEASE FACTOR SUBUNIT 1)
Source ORGANISM_COMMON: human; ORGANISM_SCIENTIFIC: Homo sapiens;
Sequence A:  PSAADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQ
ISRVAKMLADEFGTASNIKSRVNRLSVLGAITSVQQRLKL
YNKVPPNGLVVYCGTIVTEEGKEKKVNIDFEPFKPINTSL
YLCDNKFHTEALTALLSDDSKFGFIVIDGSGALFGTLQGN
TREVLHKFTVDLPKKHGRGGQSALRFARLRMEKRHNYVRK
VAETAVQLFISGDKVNVAGLVLAGSADFKTELSQSDMFDQ
RLQSKVLKLVDISYGGENGFNQAIELSTEVLSNVKFIQEK
KLIGRYFDEISQDTGKYCFGVEDTLKALEMGAVEILIVYE
NLDIMRYVLILYLTPEQEKDKSHFTESMPLLEWFANNYKK
FGATLEIVTDKSQEGSQFVKGFGGIGGILRYRVDFQGM
Description


Functional site

1) chain A
residue 279
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000269|PubMed:37651229
source Swiss-Prot : SWS_FT_FI6

2) chain A
residue 63
type MOD_RES
sequence K
description 4-hydroxylysine => ECO:0000269|PubMed:24486019
source Swiss-Prot : SWS_FT_FI2

3) chain A
residue 185
type MOD_RES
sequence Q
description N5-methylglutamine => ECO:0000269|PubMed:18539146, ECO:0000269|PubMed:20606008, ECO:0000269|PubMed:26797129
source Swiss-Prot : SWS_FT_FI3

4) chain A
residue 347
type MOD_RES
sequence T
description Phosphothreonine => ECO:0007744|PubMed:23186163
source Swiss-Prot : SWS_FT_FI4

5) chain A
residue 404
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2) => ECO:0007744|PubMed:28112733
source Swiss-Prot : SWS_FT_FI5

6) chain A
residue 87
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2) => ECO:0007744|PubMed:28112733
source Swiss-Prot : SWS_FT_FI5


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