eF-site ID 1dss-R
PDB Code 1dss
Chain R

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Title STRUCTURE OF ACTIVE-SITE CARBOXYMETHYLATED D-GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE FROM PALINURUS VERSICOLOR
Classification ACTIVE-SITE CARBOXYMETHYLATION
Compound D-GLYCERALDEHYDE-3-PHOSPHATE-DEHYDROGENASE
Source ORGANISM_COMMON: South China Sea lobster; ORGANISM_SCIENTIFIC: Palinurus versicolor;
Sequence R:  SKIGINGFGRIGRLVLRAALEMGAQVVAVNDPFIALEYMV
YMFKYDSTHGMFKGEVKAEDGALVVDGKKITVFNEMKPEN
IPWSKAGAEYIVESTGVFTTIEKASAHFKGGAKKVIISAP
SADAPMFVCGVNLEKYSKDMKVVSNASXTTNCLAPVAKVL
HENFEIVEGLMTTVHAVTATQKTVDGPSAKDWRGGRGAAQ
NIIPSSTGAAKAVGKVIPELDGKLTGMAFRVPTPNVSVVD
LTVRLGKECSYDDIKAAMKAASEGPLQGVLGYTEDDVVSC
DFTGDNRSSIFDAKAGIQLSKTFVKVVSWYDNEFGYSQRV
IDLIKHMQKVDSA
Description


Functional site

1) chain R
residue 149
type
sequence X
description ACTIVE SITE.
source : AVR

2) chain R
residue 176
type
sequence H
description ACTIVE SITE.
source : AVR

3) chain R
residue 148
type
sequence S
description BINDING SITE FOR RESIDUE SO4 R 501
source : AC3

4) chain R
residue 149
type
sequence X
description BINDING SITE FOR RESIDUE SO4 R 501
source : AC3

5) chain R
residue 150
type
sequence T
description BINDING SITE FOR RESIDUE SO4 R 501
source : AC3

6) chain R
residue 176
type
sequence H
description BINDING SITE FOR RESIDUE SO4 R 501
source : AC3

7) chain R
residue 208
type
sequence T
description BINDING SITE FOR RESIDUE SO4 R 501
source : AC3

8) chain R
residue 209
type
sequence G
description BINDING SITE FOR RESIDUE SO4 R 501
source : AC3

9) chain R
residue 149
type
sequence X
description BINDING SITE FOR RESIDUE SO4 R 502
source : AC4

10) chain R
residue 179
type
sequence T
description BINDING SITE FOR RESIDUE SO4 R 502
source : AC4

11) chain R
residue 181
type
sequence T
description BINDING SITE FOR RESIDUE SO4 R 502
source : AC4

12) chain R
residue 231
type
sequence R
description BINDING SITE FOR RESIDUE SO4 R 502
source : AC4

13) chain R
residue 6
type
sequence N
description BINDING SITE FOR RESIDUE NAD R 335
source : AC6

14) chain R
residue 7
type
sequence G
description BINDING SITE FOR RESIDUE NAD R 335
source : AC6

15) chain R
residue 9
type
sequence G
description BINDING SITE FOR RESIDUE NAD R 335
source : AC6

16) chain R
residue 10
type
sequence R
description BINDING SITE FOR RESIDUE NAD R 335
source : AC6

17) chain R
residue 11
type
sequence I
description BINDING SITE FOR RESIDUE NAD R 335
source : AC6

18) chain R
residue 31
type
sequence N
description BINDING SITE FOR RESIDUE NAD R 335
source : AC6

19) chain R
residue 32
type
sequence D
description BINDING SITE FOR RESIDUE NAD R 335
source : AC6

20) chain R
residue 33
type
sequence P
description BINDING SITE FOR RESIDUE NAD R 335
source : AC6

21) chain R
residue 34
type
sequence F
description BINDING SITE FOR RESIDUE NAD R 335
source : AC6

22) chain R
residue 76
type
sequence E
description BINDING SITE FOR RESIDUE NAD R 335
source : AC6

23) chain R
residue 77
type
sequence M
description BINDING SITE FOR RESIDUE NAD R 335
source : AC6

24) chain R
residue 95
type
sequence S
description BINDING SITE FOR RESIDUE NAD R 335
source : AC6

25) chain R
residue 96
type
sequence T
description BINDING SITE FOR RESIDUE NAD R 335
source : AC6

26) chain R
residue 97
type
sequence G
description BINDING SITE FOR RESIDUE NAD R 335
source : AC6

27) chain R
residue 99
type
sequence F
description BINDING SITE FOR RESIDUE NAD R 335
source : AC6

28) chain R
residue 119
type
sequence S
description BINDING SITE FOR RESIDUE NAD R 335
source : AC6

29) chain R
residue 120
type
sequence A
description BINDING SITE FOR RESIDUE NAD R 335
source : AC6

30) chain R
residue 149
type
sequence X
description BINDING SITE FOR RESIDUE NAD R 335
source : AC6

31) chain R
residue 180
type
sequence A
description BINDING SITE FOR RESIDUE NAD R 335
source : AC6

32) chain R
residue 313
type
sequence N
description BINDING SITE FOR RESIDUE NAD R 335
source : AC6

33) chain R
residue 314
type
sequence E
description BINDING SITE FOR RESIDUE NAD R 335
source : AC6

34) chain R
residue 317
type
sequence Y
description BINDING SITE FOR RESIDUE NAD R 335
source : AC6

35) chain R
residue 149
type catalytic
sequence X
description 911
source MCSA : MCSA2

36) chain R
residue 176
type catalytic
sequence H
description 911
source MCSA : MCSA2

37) chain R
residue 149
type ACT_SITE
sequence X
description Nucleophile
source Swiss-Prot : SWS_FT_FI1

38) chain R
residue 231
type BINDING
sequence R
description BINDING => ECO:0000250
source Swiss-Prot : SWS_FT_FI3

39) chain R
residue 77
type BINDING
sequence M
description BINDING => ECO:0000250
source Swiss-Prot : SWS_FT_FI3

40) chain R
residue 148
type BINDING
sequence S
description BINDING => ECO:0000250
source Swiss-Prot : SWS_FT_FI3

41) chain R
residue 179
type BINDING
sequence T
description BINDING => ECO:0000250
source Swiss-Prot : SWS_FT_FI3

42) chain R
residue 208
type BINDING
sequence T
description BINDING => ECO:0000250
source Swiss-Prot : SWS_FT_FI3

43) chain R
residue 176
type SITE
sequence H
description Activates thiol group during catalysis
source Swiss-Prot : SWS_FT_FI4

44) chain R
residue 1
type MOD_RES
sequence S
description N-acetylserine => ECO:0000250|UniProtKB:P00357
source Swiss-Prot : SWS_FT_FI5

45) chain R
residue 10
type BINDING
sequence R
description BINDING => ECO:0000269|PubMed:9761850
source Swiss-Prot : SWS_FT_FI2

46) chain R
residue 32
type BINDING
sequence D
description BINDING => ECO:0000269|PubMed:9761850
source Swiss-Prot : SWS_FT_FI2

47) chain R
residue 313
type BINDING
sequence N
description BINDING => ECO:0000269|PubMed:9761850
source Swiss-Prot : SWS_FT_FI2


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