eF-site ID 1dk3-A PDB Code 1dk3 Chain A click to enlarge Title REFINED SOLUTION STRUCTURE OF THE N-TERMINAL DOMAIN OF DNA POLYMERASE BETA Classification TRANSFERASE Compound DNA POLYMERASE BETA Source Rattus norvegicus (Rat) (DPOB_RAT) Sequence A:  MSKRKAPQETLNGGITDMLVELANFEKNVSQAIHKYNAYR KAASVIAKYPHKIKSGAEAKKLPGVGTKIAEKIDEFLATG KLRKLEK Description Functional site 1) chain A residue 41 type CROSSLNK sequence K description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000250|UniProtKB:P06746 source Swiss-Prot : SWS_FT_FI5 2) chain A residue 61 type CROSSLNK sequence K description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000250|UniProtKB:P06746 source Swiss-Prot : SWS_FT_FI5 3) chain A residue 81 type CROSSLNK sequence K description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000250|UniProtKB:P06746 source Swiss-Prot : SWS_FT_FI5 4) chain A residue 72 type ACT_SITE sequence K description Nucleophile; Schiff-base intermediate with DNA; for 5'-dRP lyase activity => ECO:0000250|UniProtKB:P06746 source Swiss-Prot : SWS_FT_FI1 5) chain A residue 60 type BINDING sequence K description BINDING => ECO:0000250|UniProtKB:P06746 source Swiss-Prot : SWS_FT_FI2 6) chain A residue 62 type BINDING sequence L description BINDING => ECO:0000250|UniProtKB:P06746 source Swiss-Prot : SWS_FT_FI2 7) chain A residue 65 type BINDING sequence V description BINDING => ECO:0000250|UniProtKB:P06746 source Swiss-Prot : SWS_FT_FI2 8) chain A residue 72 type MOD_RES sequence K description N6-acetyllysine => ECO:0000250|UniProtKB:Q8K409 source Swiss-Prot : SWS_FT_FI3 9) chain A residue 83 type MOD_RES sequence R description Omega-N-methylarginine; by PRMT6 => ECO:0000250|UniProtKB:P06746 source Swiss-Prot : SWS_FT_FI4

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